Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0364 ATGGCTCTCTGCGTGAGGAAATCCACTACCATCCTCACCCTTGTCAAATCAAAGACAAAGACGCCCTTTCTTTTCATGCCTTCGCCTCTGCCAAGTTCTTCCACTTCCTCCGCCTCTCTGTTTCGTCATCCGAAGACTGACTTTCTGGAAAATCTCACAAACCCAAATGGAATCACAAATCTTCTCTCTTCTCGTCGCTTTGAGTCCACTATAGCGCAAGATCGTTTCAATTCCGTTAACGATTCTTATGACAACCAGGTCTTAGATTTTCCTGGAGGGACAGTGAAATTCACCCCTGATATGAGGTTTATATCGGAATCGCCTGAGGAGAGAACACACTGCTACCGTGTCCTTGATAACGATGGGCAACCAATTTTGGGCACTGACTTTGTGAAGGTCAGCGAAGAAGTTGCTGTGAAGATGTATAATGACATGGTTACACTTCAAACTATGGACACTCTCTTCTATGAAGCACAAAGGCAAGGTAGAATTTCTTTTTATTTGACAACAATTGGAGAAGAGGCTATCAATATTGCATCAGCTGCAGCGCTCACCATGGATGACCTTATATTCCCTCAGTATAGGGAACCAGGAGTTCTGTTATGGCGTGGATTCACTCTGCAAGAATTTGCAAACCAGTGTTTTTCCAATAAATATGATAATGGGAAAGGAAGGCAGATGCCGATCCATTATGGGTCAAACAAACACAATTACATTACTGTAGCATCGACAGTTGCTTCACAACTTCCCCATGCTGTTGGAGCAGCATATTCCTTAAAGATGGACGAAAAGGATGCATGTGCTGTCACTTATTTCGGTGATGGTGGCTCAAGTGAGGGTGATTTCCATGCTGCTTTAAATTTTGCAGCTGTTATGGAGGCCCCTGTTATCTTTATATGCCGGAACAATGGATGGGCTATCAGCACTCCTACTGCAGATCAGTTTCGAAGTGATGGAGTTGTTGTGAAAGGGCGAGCATATGGAGTCCGTAGTATCCGTGTAGATGGCAATGATGCCCTGGCCATTTATAGTGCTGTTCAAGCTGCACGTCGAATGGCAGTTAGTGAACACAGACCAGTTCTACTTGAGGCACTAACATATAGAGCAGGACACCACTCCACATCTGATGATTCCACCAAATATCGCCCAGCCAATGAGATTGAATGGTGGAGATTGGCACGAGATCCTGTGTCTAGATTTAGAAAGTGGATTGAAAGGAATGGTTGGTGGAATGCTAAGGCTGAGTCAGAGCTGAGGAACAATACAAGACAGAGGCTACTACATGCAATTCAAGTGGCAGAGAAGGTAGATAAACCTCCACTTGCAGACATTTTCACTGATGTTTATGATGTCCCTTCTTCCAACCTCCACGAACAAGAGCAATGGCTGAAAGAGACTATAAGAACACATCCACAAGATTACCCGGCAAATATGTCTGTCTAG 1443 0.4435 MALCVRKSTTILTLVKSKTKTPFLFMPSPLPSSSTSSASLFRHPKTDFLENLTNPNGITNLLSSRRFESTIAQDRFNSVNDSYDNQVLDFPGGTVKFTPDMRFISESPEERTHCYRVLDNDGQPILGTDFVKVSEEVAVKMYNDMVTLQTMDTLFYEAQRQGRISFYLTTIGEEAINIASAAALTMDDLIFPQYREPGVLLWRGFTLQEFANQCFSNKYDNGKGRQMPIHYGSNKHNYITVASTVASQLPHAVGAAYSLKMDEKDACAVTYFGDGGSSEGDFHAALNFAAVMEAPVIFICRNNGWAISTPTADQFRSDGVVVKGRAYGVRSIRVDGNDALAIYSAVQAARRMAVSEHRPVLLEALTYRAGHHSTSDDSTKYRPANEIEWWRLARDPVSRFRKWIERNGWWNAKAESELRNNTRQRLLHAIQVAEKVDKPPLADIFTDVYDVPSSNLHEQEQWLKETIRTHPQDYPANMSV 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0364 480 CDD TPP_E1_PDC_ADC_BCADC 141 433 - -
Glsi02g0364 480 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 79 478 - -
Glsi02g0364 480 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 125 475 IPR029061 -
Glsi02g0364 480 FunFam 2-oxoisovalerate dehydrogenase subunit alpha 83 479 - -
Glsi02g0364 480 Gene3D - 83 479 - -
Glsi02g0364 480 Pfam Dehydrogenase E1 component 145 439 IPR001017 GO:0016624
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0364 Glsi-ChrGlsi02 2330314 2334908 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0364 84 318 Acyl Lipid Metabolism Gene Families AT5G09300 79.574 5.51e-142 409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0364 02 2330314 2334908 Glsi02g0364 02 2330314 2334908 ECH