Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0347 ATGCTATCTTCCCCCTTTTCTTCTCCTGAAGCAGCGCAGCAAAACGAGTCTAATTTGGAGTTTGCAAATGGGGGGATTAAACTGTTGAAGCCTGGGAGAGAGTGCGCAACTGAGATATCTGCATTTCTGGAATTCAAGCTGTGTTGCGATTTCACGAGGAATTTTCCTATAATTTCTCGCATAGTTGCTGTATTCGGTGCTCAATTTTCTCGAGACGAAGTGGATTTTTTAATTCTTTCCATAACTGGGGTTGATCATGGTAAATTGAGGATGGTGAGGCTTTTAGGGCTGACTCGTGGAGAGACAGATGAGCCTCGGGAAATCACCCCGAGGTCCAACCTGACCAGTGAGTCTGGCGAAAATGGGTGGCTCATCAGGTTTTTTGACTCGGCATTCTTCTGCGAGTGGATTGCTGTTAGCTACTTGTACAAGCATGACCACTCTGGGGTACGTGACTATCTTTGTAATCGAATGTATACCCTACCCTTACAGGGAATTGAGAGTTATTTGTTCCAAATATGTTACATGATGGTACACAAGCCAAGCCCCTCCTTGGATAAATTTGTAATAGATGTGTGCTCTAAGTCACTTAAGATTGCTTTGAAGGTGCACTGGTTTTTATTGGCAGAGCTCGAGGACTCTGATGACAACGAAGGAATTAGTAGGATTCAGGAGAAGTGCCAGATTGCAGCGACCTTGATGGGTGAGTGGCCTCCTTTGATACGGCCTCAAAGTGAACCTTCTAGCACTGGTGGTAAAAACCAAGTTTTGAATAAGTTGCTATCATCAAAACAGCGTTTGTTGTCACTAACATCTTCACCTCCATCTCAGAAATCGTTATCATTCTCACCTTCTTCAGGAAAATTGCAAGAGGATGGTAATCAGTTGTCTCCTGATGAGAATAAGATATTTAAGAAATTCATACCTAGTCCAAAGGTACGAGATGCCTTTCTATTTAGAAAGTCAGTAGAGAAAGATGATAATGATTCTGAAAAGGACGGCTTTTTCAAGAGGCTGTTAAGAGATAGTAAAGGTGATGATGATTTGGCACCAAAAATCCGAGATTCATTTCTCTTTTGGAAGTCATCTGATAAAGAAGATGAAGACTCTGAAAAAGATGGTTTCTTTAGAAGGCTTTTAAGAGACAATAGAGGTGGTGATGATGATGACACAGATGGATTTTTCAAACGATTGTTTCGTGATAGCAAGAATGATTCTGAGGACAAAACACACACTAAATCAACAGAAGATGAAGAGAAAGAAGGATTTTTCCAAAAAATTTTCAGGGAGAAGTTTGATGATAGGAAGGATGGCAATGATTGGACTGATGATGGTGACATTGCTAATTCTGAAGAAAAATGTACAAAATCTGCTGAAGAGGAGGAAAAAGAAGGGTTTTTCAGGAAATTCTTCAAGGATAAATTTGAGGATAAGAAAGATACAAATGGTAAAATTGACGAGTGTACCACCAATGGTGAGGAAGAAGAGCCTTCTGAGTTTTCTTTGTTCAAAAGACTATTTCATGTGCACCCTGAAGATGCTAAAAGTAGATCAGCCAATGAAAGCAACAATTCTGGTGGTTTGTTTGAAAGTAGTCCAGGTACAGAGAATTTTTTTCGCAAATTGTTCAGAGACCGTGACCGCTCAATTGAAGATTCAGAGCTTTTGGGGTTGAAGAAGCAGAAGGAGAAGCATCCTGGGTCACCAAAGCAACAAAGTGAAAAATCAAACATGAAGCCTCCACTTCCTAATAACAATATGTCACAGTTCCGGAAAGGGGCATACCATGAGTCTTTGGACTTGGTCCAGTCATTATGTGAGACATCATTTGGGTTAGTGGATGTATTTCCAATTGAAGATCGCAAAAGTGCTCTTTGTGAGTCACTTAGAGAAATCAATTTACATGTAGCTGAGGCTCAAAATACTGGAGGAGTTTGTTTTCCATTGGGAAAGGGCATGTGTCGTGTGCTTCATATACCTGAAGATGAAGCTGTTCTCTTAAATTCTAGGGAGAAGGCTCCTTATCTGATCTGCGTTGAACTTTTGAAATGTGAATTGCCAAGCATTTCCAAGGAGACATCCAGTTCTCAGAAGCTTTCTAAAGGTGGAATTCCTTTGGCAAATGGAGATGCTTTCTTGCAAAAACCACCCCCTTGGGCTTATCCATTATGGACTGCACAAGAGGTGTATCGTAATATCAACGACAGAATGTCCAGATCAACTGCTCAAGCAATTGACCAGGCAATGTCTCATGTGTCTGAAGCGAAAGTTAAATTTGTTAGTGTGAGTCTTTCCTTGGAAACACAGTTATTTAGCCAAACAGAGAAGACTGAAGTACTTGATTTACAAGGTGGCAGTCAAAGTACTGCTTCAAATCTTAAAGTAGGTGTAAGAGAAGCATCAATAGCAGGACATAACAGTGATTTGGAGTGGGTTCGTGTTGTATTGACAGCTGATCCTGGGGTTAGAATGGAAGATATTAAGGATCCAACTCCACCTCGGCGGAAGGAACATCGCCGTGTTCCAAGTACAGTGGCAATAGAGGAAGTCAAGGCTGCGGCAGCAAAAGGGGAAGCACCTCTAGGACTCCCTTTGAAAGGTGCTGGTCAAGATTCATCAGATGCACATCCAAGGCCTAATGGAAGTGTTCCCAAGGCCAGTGATGCCTTGTCTGGTGAACTTTGGGAGGCAAAGAAAGAGAGGATACGAAGGGCTTCAATATATGGGAATTTACCTGGTTGGGACTTGCGATCTGTAATTGTAAAGAGTGGTGATGATTGCAGACAAGAGCATCTCGCAGTTCAACTTATTTCTCACTTCTATGATATATTCCAAGAAGCTGGTCTACCTCTCTGGTTGCGCCCTTATGAAGTTTTATGCACTTCTTCTTACACAGCTCTCATTGAAACAATTCCAGATACGGCTTCACTTCATTCTATCAAAAGTAGATATCCCAACATTTCAAGTTTACGTGAATTCTTTGTCGCCAAGTATCAAGAAAATTCTCCGAGTTTTAAAATTGCCCAGAGGAACTTTGTTGAGAGTATGGCTGGATATTCCCTAGTGTGCTATCTTCTGCAGTTGAAGGATAGGCATAATGGGAACCTCTTAATGGATGAAGAAGGTCATATTATACATATTGATTTTGGCTTCATGCTTTCGAATTCCCCTGGTGGTGTTAACTTTGAAAGTGCTCCTTTCAAATTAACCCGAGAGCTTCTTGAGGTCATGGATTCCGATGCTGAAGGCATTCCAAGCGAGTTCTTTGATTATTTCAAGGTTTTATGCATTCAAGGCTTCCTTACTTGTCGCAAGCATGCTGAGCGTATTATTCTGCTGGTTGAAATGTTGCAGGACTCAGGTTTTCCATGCTTTAAAGGTGGTCCACGGACAATACAGAACTTACGAAAGCGATTTCATCTCAGTTTAACAGAAGAGCAATGTGTCTCTTTGGTGCTTTCACTAATTAGCAGCAGCCTTGATGCATGGCGGACACGGCAGTATGATTACTATCAGAGGGTTTTGAATGGAATATTGTACCTGGGCCCGTGGCCGTGGGAAAAATCCCTAAATAAAACCCTCCCCTTCCGACCCTTTACCTCGTTGTCCAAATTCGGCTTGGTGTGTGCGGAGACTCTTCCCTGCCTCCTTCCCTGGGTTCCATTGTGCCGATGTCTTTTTATCTCATAA 3690 0.4184 MLSSPFSSPEAAQQNESNLEFANGGIKLLKPGRECATEISAFLEFKLCCDFTRNFPIISRIVAVFGAQFSRDEVDFLILSITGVDHGKLRMVRLLGLTRGETDEPREITPRSNLTSESGENGWLIRFFDSAFFCEWIAVSYLYKHDHSGVRDYLCNRMYTLPLQGIESYLFQICYMMVHKPSPSLDKFVIDVCSKSLKIALKVHWFLLAELEDSDDNEGISRIQEKCQIAATLMGEWPPLIRPQSEPSSTGGKNQVLNKLLSSKQRLLSLTSSPPSQKSLSFSPSSGKLQEDGNQLSPDENKIFKKFIPSPKVRDAFLFRKSVEKDDNDSEKDGFFKRLLRDSKGDDDLAPKIRDSFLFWKSSDKEDEDSEKDGFFRRLLRDNRGGDDDDTDGFFKRLFRDSKNDSEDKTHTKSTEDEEKEGFFQKIFREKFDDRKDGNDWTDDGDIANSEEKCTKSAEEEEKEGFFRKFFKDKFEDKKDTNGKIDECTTNGEEEEPSEFSLFKRLFHVHPEDAKSRSANESNNSGGLFESSPGTENFFRKLFRDRDRSIEDSELLGLKKQKEKHPGSPKQQSEKSNMKPPLPNNNMSQFRKGAYHESLDLVQSLCETSFGLVDVFPIEDRKSALCESLREINLHVAEAQNTGGVCFPLGKGMCRVLHIPEDEAVLLNSREKAPYLICVELLKCELPSISKETSSSQKLSKGGIPLANGDAFLQKPPPWAYPLWTAQEVYRNINDRMSRSTAQAIDQAMSHVSEAKVKFVSVSLSLETQLFSQTEKTEVLDLQGGSQSTASNLKVGVREASIAGHNSDLEWVRVVLTADPGVRMEDIKDPTPPRRKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDAHPRPNGSVPKASDALSGELWEAKKERIRRASIYGNLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTALIETIPDTASLHSIKSRYPNISSLREFFVAKYQENSPSFKIAQRNFVESMAGYSLVCYLLQLKDRHNGNLLMDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGIPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGFPCFKGGPRTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGILYLGPWPWEKSLNKTLPFRPFTSLSKFGLVCAETLPCLLPWVPLCRCLFIS 1229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0347 1229 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 1015 1035 IPR018936 GO:0016301
Glsi02g0347 1229 MobiDBLite consensus disorder prediction 553 570 - -
Glsi02g0347 1229 MobiDBLite consensus disorder prediction 270 301 - -
Glsi02g0347 1229 MobiDBLite consensus disorder prediction 861 889 - -
Glsi02g0347 1229 MobiDBLite consensus disorder prediction 403 422 - -
Glsi02g0347 1229 SUPERFAMILY ARM repeat 144 216 IPR016024 -
Glsi02g0347 1229 SMART pi3k_hr1_6 918 1177 IPR000403 -
Glsi02g0347 1229 MobiDBLite consensus disorder prediction 571 589 - -
Glsi02g0347 1229 Gene3D - 976 1177 IPR036940 -
Glsi02g0347 1229 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 921 935 IPR018936 GO:0016301
Glsi02g0347 1229 MobiDBLite consensus disorder prediction 479 502 - -
Glsi02g0347 1229 Pfam Phosphatidylinositol 3- and 4-kinase 918 1125 IPR000403 -
Glsi02g0347 1229 MobiDBLite consensus disorder prediction 270 297 - -
Glsi02g0347 1229 FunFam phosphatidylinositol 4-kinase beta 1 812 971 - -
Glsi02g0347 1229 Gene3D - 812 971 - -
Glsi02g0347 1229 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 893 1164 IPR000403 -
Glsi02g0347 1229 SUPERFAMILY Protein kinase-like (PK-like) 624 1172 IPR011009 -
Glsi02g0347 1229 MobiDBLite consensus disorder prediction 553 589 - -
Glsi02g0347 1229 MobiDBLite consensus disorder prediction 435 459 - -
Glsi02g0347 1229 Gene3D - 130 236 IPR042236 -
Glsi02g0347 1229 PANTHER PHOSPHATIDYLINOSITOL KINASE 134 1179 IPR015433 GO:0046854|GO:0048015
Glsi02g0347 1229 FunFam Phosphatidylinositol 4-kinase beta 1 976 1177 - -
Glsi02g0347 1229 CDD PI4Kc_III_beta 887 1179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0347 Glsi-ChrGlsi02 2230129 2244455 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0347 89 1178 Lipid Metabolism Gene Families AT5G09350 70.175 0.0 1546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0347 02 2230129 2244455 Glsi02g0347 02 2230129 2244455 ECH