Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0238 ATGTGTGTCCACCAGAAGTTTCTAAAAGCAGCTATTAGCAATAAATTTCTTCAAAGTTCAAACCAAGGTGGCTTTGATGTCTCAACCCAAATATTGTGGTTTTTAGTTACAGTAGTGTTCCCAATCCCACCTAAAAGTTGTTCAAGTGGAGTGGAGGACGTCGATGTTGACATCACTGTCTAAATGGGAGTTGGAGGAACTCTGGAATACTTGTCTGATCTAATGGGAAGTGGCCATCACTACAAGAAGAAGAAGAAGAAGCAGTTACAGACCGTGGAGCTGAAGGTTAGGATGGACTGCGATGGCTGTGAGCTTAAAGTCAAGAAAGCACTCTCTTCATTAAGTGGAGTAAAATCGGTGGATATGAACAGGAAACAGCAGAAAGTGACGGTAACTGGGTATGTTGAACCAAACAAGGTCCTAAAGAAGGCCAAGTCAACAGGGAAAAGGGCTGAGATTTGGCCCTATGTGCCTTACAACTTAGTGGCTCATCCATATGCTGCTCCAGCTTATGACAAGAAGGCTCCTCCTGGTTATGTCAGGAACTTAGAGACCACAGCCACCGTTGCAACCGTCACAAGATATGAAGACCCTTACATCACCATGTTCAGTGATGACAACCCTAATGCCTGCTCTATTATGTAA 645 0.4388 MCVHQKFLKAAISNKFLQSSNQGGFDVSTQILWFLVTVVFPIPPKSCSSGVEDVDVDITVXMGVGGTLEYLSDLMGSGHHYKKKKKKQLQTVELKVRMDCDGCELKVKKALSSLSGVKSVDMNRKQQKVTVTGYVEPNKVLKKAKSTGKRAEIWPYVPYNLVAHPYAAPAYDKKAPPGYVRNLETTATVATVTRYEDPYITMFSDDNPNACSIM 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0238 214 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 91 212 IPR045181 GO:0046872
Glsi02g0238 214 ProSiteProfiles Heavy-metal-associated domain profile. 89 152 IPR006121 GO:0046872
Glsi02g0238 214 Gene3D - 78 155 - -
Glsi02g0238 214 FunFam Heavy metal-associated isoprenylated plant protein 26 79 154 - -
Glsi02g0238 214 SUPERFAMILY HMA, heavy metal-associated domain 89 155 IPR036163 GO:0046872
Glsi02g0238 214 Pfam Heavy-metal-associated domain 95 149 IPR006121 GO:0046872
Glsi02g0238 214 CDD HMA 93 152 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0238 Glsi-ChrGlsi02 1544866 1548047 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0238 02 1544866 1548047 Glsi02g0238 02 1544866 1548047 CCT
Glsi02g0238 02 1544866 1548047 Glsi02g0238 02 1544866 1548047 ECH