Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0147 ATGGGGAGGCCGTCCTTCTTCTTCTTGTTCACTCTTGTCTCTGCGCTTCCTCTTCTAATAGTGACGGCTCTACCGCTATACACGAATTCCCGGTGGATCGTGAACGAAGGTGGACAGCGGGTGAAGCTGGCATGTCTGAATTGGGTGTCCCATCTGGAACCCATAGTGGCGGAGGGCCTCAGTAAGCAGCCTCTGGATGCGATTTCCCACGGAATCAAATCCATGGGATTCAACTGCGTTAGGCTCACTTGGCCGCTTCTCCTCGTCACCAACGACTCTCTAGCCTCTCTCACCGTAAGACAGTCCTTTCAGAACCTTGGCCTGCTTGAGTCCATCGCTGGTATCCAAGCCAACAACCCCTCAATCATCGATCTTCCCCTCATCAAAGCTTACCGGTCAGTGGTGAAAAGCCTCGGTGACAACGATGTGATGGTGATATTGGATAACCACGTGACGCAGCCCGGGTGGTGCTGCAGCAACTCAGACGGCAATGGTTTCTTCGGGGACCGCTATTTCGACCCAACCCTCTGGTTGCAGGGCCTCACCAACATGGCTACCATTTTCAAAGGGGTGACCAATGTGGTGGGCATGAGCTTGAGAAATGAATTGCGAGGCCCAAAACAAAACGTTAACGATTGGTACAGGTATATGGAAAAAGGAGCAGAAGCAGTACATGGAGCAAACCCGGATGTTCTTGTCATTCTGTCTGGCCTGAATTTTGACAAAGACTTGTCGTTTCTTCGAAATCGAGCAGTGAATGTGACCTTTATGGGGAAACTAGTGTTTGAGGCACACTGGTATGCCTTCACGGACGGTGAAGCATGGAAATCAGGGAACCCAAACCAAGTGTGTGGACAAATAGCAGGAAACGTTATGCGAATGTCGGGCTTTTTGTTGGAACAGGGATGGCCCTTGTTTGTCAGCGAGTTTGGGGTGGACTTACGAGGTACCAACGTAAATGACAACAGATACTTGAACTGCTTCATGGGTGTGGCTGCTGAACTCGACTTAGATTGGGCGTTGTGGACACTTGTCGGCAGTTATTACCTAAGAGAAGGGGTTGTAGGGATGAATGAGTATTATGGAGTTCTTGATTGGGACTGGTGCCATCAAAGAAACACAAGTTTCTTACAGAGGATATCTGCTCTCCAATCTCCTTTTCGAGGGCCAGGCATATCAGAAGGCAGGCCATATAAAGTGATTTTCCATCCATTGACGGGTCTCTGCATCATAAGAAAATCACTGATTGACCCATTGAGATTGGGACCCTGCTCTGAATCCGATGGCTGGAAATACACACCCCAAAACATACTAACAATAAAGGGTACGTATTTCTGCTTACAAGAAGACGGTGTAGGGAAGGCGGCAAAAATAGGAATAATATGCACGGGTCCTAATTCCAAATGGGAAATGATCTCAGATTCTAAGATGCACCTATCGTCAAGTCATAGCAACGGTTCTAGAGTTTGTCTGGATGTAGACACCAACAACATCATCGTCACCAATACTTGCAAATGTTTGAGCAGAGATAATAGATGTGATCCTGGGAGCCAATGGTTCAAACTTGTTGACACCACAAGGATTTCAGCCTCAACAAACTCGATGTTGAAATTACCAAGAAGTGGCGTTGCCTGGGAATCATTGAGCACAATATAA 1656 0.4771 MGRPSFFFLFTLVSALPLLIVTALPLYTNSRWIVNEGGQRVKLACLNWVSHLEPIVAEGLSKQPLDAISHGIKSMGFNCVRLTWPLLLVTNDSLASLTVRQSFQNLGLLESIAGIQANNPSIIDLPLIKAYRSVVKSLGDNDVMVILDNHVTQPGWCCSNSDGNGFFGDRYFDPTLWLQGLTNMATIFKGVTNVVGMSLRNELRGPKQNVNDWYRYMEKGAEAVHGANPDVLVILSGLNFDKDLSFLRNRAVNVTFMGKLVFEAHWYAFTDGEAWKSGNPNQVCGQIAGNVMRMSGFLLEQGWPLFVSEFGVDLRGTNVNDNRYLNCFMGVAAELDLDWALWTLVGSYYLREGVVGMNEYYGVLDWDWCHQRNTSFLQRISALQSPFRGPGISEGRPYKVIFHPLTGLCIIRKSLIDPLRLGPCSESDGWKYTPQNILTIKGTYFCLQEDGVGKAAKIGIICTGPNSKWEMISDSKMHLSSSHSNGSRVCLDVDTNNIIVTNTCKCLSRDNRCDPGSQWFKLVDTTRISASTNSMLKLPRSGVAWESLSTI 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0147 551 Gene3D Glycosidases 24 385 - -
Glsi02g0147 551 SUPERFAMILY (Trans)glycosidases 24 377 IPR017853 -
Glsi02g0147 551 Pfam Cellulase (glycosyl hydrolase family 5) 64 344 IPR001547 GO:0004553|GO:0071704
Glsi02g0147 551 PANTHER CELLULASE FAMILY PROTEIN (AFU_ORTHOLOGUE AFUA_5G14560) 16 527 - -
Glsi02g0147 551 CDD RICIN 398 504 IPR000772 -
Glsi02g0147 551 SUPERFAMILY Ricin B-like lectins 395 521 IPR035992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0147 Glsi-ChrGlsi02 949220 952125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0147 23 527 Glycoside Hydrolase AT1G13130 62.475 0.0 670
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0147 02 949220 952125 Glsi02g0147 02 949220 952125 ECH