Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0139 ATGGGCCTGGCCCAACCGACACAGCCTTCCCCACCCAAATCACTACCAGTGCACAAAGTGCGCACGGATGGCACCCCACACTGCTCCTCTATACTGAAATTACTGACCACTGCCTTAAATGGATCTGTGATCCATGGTGTTTTACTGCGCCTTGTTTGCTTGATCATGAATCCTCTGTGCTGCATTGCTCCCGTTTCGATCGATCGGGACCGAGCTAACCCTGTGGTGCCCAAATCATCCGCTCACTGTCCGTTAGGGCTAGATGCATCTACTGTCAATTATGGTTCCAAACCCAGCGTTTCCACTCTTGATTCATCACTTGCTACTGATTCCAACAAACCGTCCTTCACTTCGAATCACGATGATGAAGATGCGGTCAATGAACCTAGAGATTCGAAGGTCTTCAGCGGCACTGTAGCTGGAATTTTGTACAAGTGGGTGAATTATGGCAAAGGTTGGAGGTCCCGGTGGTTCGTGCTTGAGGATGGGGTGCTTTCATATTACAAGATTCATGGTCCAGATAAGATTTGGGTGAGTCCGGCCAGAGACAGGAGCGTCAGGGTGATCGGGGAGGAGTCTTCTAAGTATATGAAGAAGGCAAATTGGAATCTAAATCGGCTGGGGGGCGCCACCAAGCAATGCAGACCCTTCGGTGAGATACATTTGAAGGTTTCATCAATTCGTGCCAGCAAATCTGATGATAAGCGACTTTCCATATTTACTGGGACTAAAACTCTTCACTTGCGTTGTGTATCTAGAGAAGACAGAGCTATGTGGATTGAGGCACTGCAGTCTGCAAAAGATCTTTTCCCTAGATCTTTAACAAGCAGTGATCTTGCAACTTCAGAAGATATTGTAGTTTCAACAGAGAAGTTACGATCAAGATTGTCACAGGAAGGCATATGTGAAGCAGTAATTAAAGACTGTGAATCCATTATGCTTTCTGAAGTCTCTTACCTTCAAGAGCGGATGAAGTTTCTTCAGCAGAAACATGTGATGTTGTTGGACACGTTAAAACAACTAGAGACTGAGAAAATAGAGTTAGAAACTACTGTAGTGGATGAAACAAAGGAGCGTGAGTCATATTGTGGACAAGGGAATAGAAGGTTTAGTGATTTCTATTCTGTCATGTCAGAGGGCAGTGCTACTGATTCGGTGGCAGATAACGAAAGTCAAGATGGAGTAGATGTTGAAACAGATGATGATGATGGAACATATTTTGACACTAACGAGTTTTTGTCTTCAGATGCTCTAAGAAGTGCTTCCTACCGAAGTAGGGAAGGTATGGGAAATGCTTGTATATATGATCGAGATTCTTTCTTTTCTGATGGTTTGCAGAAGGAGATCGAAGATGTAAATTATCCATATGTCAAAAGAAGGGATAATTTACCAGAGCCAAAAGAGAAAGAGAAGCCTGTTGGCTTGTGGTCAATTATTAAGGACAACATTGGCAAGGATCTTTCTGGAGTTTGTCTCCCTGTTTATTTTAACGAGCCACTCTCTTCATTGCAAAAGTGCTTTGAAGACTTGGAGTATTCATACTTGGTTGATAGAGCATTGGAGTGGGGAAAGCAGGGGAATGATTTGATGAGAATTCTAAATATTGCAGCTTTTGCTGTGTCGGGCTATGCATCAACAGAAGGTCGTCAGTGCAAACCCTTTAATCCTCTACTTGGGGAGACCTATGAAGCTGACTATCCAGACAAAGGACTTAAGTTTTTCTCTGAAAAGGTTAGTCATCATCCCATGGTTGTTGCTTGTCACTGTGAGGGAAAAGGATGGAAATTCTGGGCAGACTCCACTTTAAAAGGAAAGTTTTGGGGGCGTTCTATTCAGCTTGATCCTGTGGGTGTCCTCACCCTTCAGTTTGAAGATGGTGAAACATTTCAGTGGTGCAAGGTGACCACGTCAATATACAACATCATACTAGGAAAAATTTATTGTGACCACTATGGTACCATGCGCATCAAAGGCAGTGGCAATTACTCCTGCAAGCTCAAGTTCAAAGAGCAATCTATCATAGACCGAAATCCACATCAGGTCCATGGGTTTGTTCAAGACAATAGAACTGGAGAGAAGGTGGCAATGTTAATTGGGAAGTGGGATGGGGCAATGTATTATGTCCTCGGGGATCCGACTACAAAGCCCAAAGGGTATGATCCAATGACAGAAGCTGCATTGTTATGGGAAAGGGACACCTACTTTACTAAGACAAGATACAACCTCTCTCCTTTTGCAATATCCTTGAACGAAATAACACCTGGTTTATCAGAGAAGTTGCCTCCAACTGACTCAAGGCTTAGACCAGATCAAAGACATTTAGAAAATGGAGAATACGAGTTGGCAAATTCAGAGAAACTACGACTTGAACAGTTGCAGAGACAGGCAAGAAAGATGCAGGAAAGAGGATGGCAACCCAGATGGTTTCAAAAAGATGAGGATGGTTCGTACCGATATGTGGGGGGCTATTGGGAAGCCAGAGAGAGAAAAAGTTGGGATGGAATTCCTGATATATTTGGACAAAGTTGTGATTTGCCTTCATGTTCTGAAGAGACTCTATCCTAG 2565 0.4359 MGLAQPTQPSPPKSLPVHKVRTDGTPHCSSILKLLTTALNGSVIHGVLLRLVCLIMNPLCCIAPVSIDRDRANPVVPKSSAHCPLGLDASTVNYGSKPSVSTLDSSLATDSNKPSFTSNHDDEDAVNEPRDSKVFSGTVAGILYKWVNYGKGWRSRWFVLEDGVLSYYKIHGPDKIWVSPARDRSVRVIGEESSKYMKKANWNLNRLGGATKQCRPFGEIHLKVSSIRASKSDDKRLSIFTGTKTLHLRCVSREDRAMWIEALQSAKDLFPRSLTSSDLATSEDIVVSTEKLRSRLSQEGICEAVIKDCESIMLSEVSYLQERMKFLQQKHVMLLDTLKQLETEKIELETTVVDETKERESYCGQGNRRFSDFYSVMSEGSATDSVADNESQDGVDVETDDDDGTYFDTNEFLSSDALRSASYRSREGMGNACIYDRDSFFSDGLQKEIEDVNYPYVKRRDNLPEPKEKEKPVGLWSIIKDNIGKDLSGVCLPVYFNEPLSSLQKCFEDLEYSYLVDRALEWGKQGNDLMRILNIAAFAVSGYASTEGRQCKPFNPLLGETYEADYPDKGLKFFSEKVSHHPMVVACHCEGKGWKFWADSTLKGKFWGRSIQLDPVGVLTLQFEDGETFQWCKVTTSIYNIILGKIYCDHYGTMRIKGSGNYSCKLKFKEQSIIDRNPHQVHGFVQDNRTGEKVAMLIGKWDGAMYYVLGDPTTKPKGYDPMTEAALLWERDTYFTKTRYNLSPFAISLNEITPGLSEKLPPTDSRLRPDQRHLENGEYELANSEKLRLEQLQRQARKMQERGWQPRWFQKDEDGSYRYVGGYWEARERKSWDGIPDIFGQSCDLPSCSEETLS 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0139 854 MobiDBLite consensus disorder prediction 381 401 - -
Glsi02g0139 854 FunFam oxysterol-binding protein-related protein 1D isoform X1 560 733 - -
Glsi02g0139 854 Gene3D - 560 726 - -
Glsi02g0139 854 Pfam Pleckstrin homology domain 141 265 - -
Glsi02g0139 854 ProSiteProfiles PH domain profile. 136 268 IPR001849 -
Glsi02g0139 854 SUPERFAMILY PH domain-like 139 273 - -
Glsi02g0139 854 Gene3D - 136 270 IPR011993 -
Glsi02g0139 854 Gene3D - 771 833 - -
Glsi02g0139 854 MobiDBLite consensus disorder prediction 103 130 - -
Glsi02g0139 854 MobiDBLite consensus disorder prediction 116 130 - -
Glsi02g0139 854 FunFam Oxysterol-binding protein-related protein 2A 771 841 - -
Glsi02g0139 854 Pfam Oxysterol-binding protein 475 828 IPR000648 GO:0008289
Glsi02g0139 854 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 138 827 IPR000648 GO:0008289
Glsi02g0139 854 Coils Coil 324 358 - -
Glsi02g0139 854 SMART PH_update 137 270 IPR001849 -
Glsi02g0139 854 SUPERFAMILY Oxysterol-binding protein-like 469 841 IPR037239 -
Glsi02g0139 854 CDD PH_ORP_plant 139 272 - -
Glsi02g0139 854 Coils Coil 782 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0139 Glsi-ChrGlsi02 895269 902373 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0139 02 895269 902373 Glsi02g0139 02 895269 902373 ECH