Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0122 ATGGATATGATGCTATACCAGCTTTCCCGGTTACCTTACCAGGATTCCCTGAAACTACTGGAGGCTGATATTCAGCATGCCAATGCTTTGGCTGCTGCAATTCCCCGAGCCAAGGGTGGGACTCTTTTTCAAATGAAATTGGTTTACAATCACTGGGCTCCACTCTTTCTGTTCTTGCTACAATGGATGGATTGTTCTTGCGCATGCTTTCTACACAGATATCTGAGCCTCTTCCACGTGCTTATATATAAGGTACACAAAGAGGGGAGATCAAACATGTCTACTCATGGAAGGAAAGCTACCATCAGGGACTTCTATGCTGTTATATTGCCATCTCTCCAGCGGCTGCATGGCAGCTTGGAGAAGTTGGAAATTTCTAGAGAAGGGTACTCTAGCTTAGAAGGTCCAAGTTCTAGAAAGAAGATGGTTGAAGGAGATGGGAGACTAGCCAATGTCGATCTGGAGAGAGAGGATGAATGTGGAATCTGCTTGGAACCTTGCACCAAAATGGTTTTGCCTAACTGCTGTCATGCCATGTGTATTAAATGCTACCGCAAGTGGAATAGACGGTCAGAGTCTTGTCCATTTTGTCGGGGTAGCTTGAGGAGAGTTAATTCAGAGGACTTATGGGTACTCACTTGTAATGAAGATGTTGTTGATGCTGAAACAGTTTGCAAGGAGGACTTGTTGCGTTTCTACCTCTACGTCAACAGCCTACCTAAGGATTACCCAGATGCACTTTTCCTAATGTATTATGAATACTTGATTTAA 771 0.4397 MDMMLYQLSRLPYQDSLKLLEADIQHANALAAAIPRAKGGTLFQMKLVYNHWAPLFLFLLQWMDCSCACFLHRYLSLFHVLIYKVHKEGRSNMSTHGRKATIRDFYAVILPSLQRLHGSLEKLEISREGYSSLEGPSSRKKMVEGDGRLANVDLEREDECGICLEPCTKMVLPNCCHAMCIKCYRKWNRRSESCPFCRGSLRRVNSEDLWVLTCNEDVVDAETVCKEDLLRFYLYVNSLPKDYPDALFLMYYEYLI 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0122 256 ProSitePatterns Zinc finger RING-type signature. 175 184 IPR017907 -
Glsi02g0122 256 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 136 209 IPR013083 -
Glsi02g0122 256 Pfam Ring finger domain 158 198 IPR001841 -
Glsi02g0122 256 PANTHER RING FINGER PROTEIN 41, 151 12 254 - -
Glsi02g0122 256 SMART ring_2 160 197 IPR001841 -
Glsi02g0122 256 FunFam RING/U-box superfamily protein 140 207 - -
Glsi02g0122 256 SUPERFAMILY RING/U-box 152 202 - -
Glsi02g0122 256 ProSiteProfiles Zinc finger RING-type profile. 160 198 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0122 Glsi-ChrGlsi02 831296 832903 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0122 02 831296 832903 Glsi02g0122 02 831296 832903 ECH