Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0110 ATGTTAAAAAACCCGGATATTCCATTGTTCCACGAAGCATCAGACAAGAAGATTAAGATTGGAATCAATGGTAATTCATTCTCTTTTGTGTTATACGATGTTATTGGATTTGGAAGAATTGGCCGTTTGGTGGCCAGGGTTGCCCTTCAACGCCACGATGTTGAGCTCGTTGCAATCAACGACCCTTTCATCACCACTGACTACATGAGATATATGTTCAAGTACGACACCGTTCATGGCCAGTGGAAGCATTATGATCTTAAGGTGAAGGACTCTAAGACCCTTCTCTTTGGAGAGAAGCCCGTCGCCGTCTATGGAATCAGGAACCCTGCAGAGATCCCATGGGCTGAGGCTGGCGCTGAATTTGTTGTTGAATCTACTGGTGTCTTCACAGACAAGGAAAAGGCTGCCGCCCACTTGAAGGGTGGTGCTAAGAAGGTTGTCATTTCTGCCCCTAGTAAGGATGCACCCATGTTTGTTGTTGGTGTTAACGAGAAGGAATACAAGCCAGAGCTTGACATTGTTTCCAATGCTAGCTGCACTACGAATTGCCTTGCGCCGCTCGCCAAGGTTATCAACGATAGGTTTGGAATTGTCGAGGGTCTTATGACCACTGTTCACGCCATCACTGCCACCCAGAAGACTGTTGATGGTCCATCAAACAAGGACTGGAGGGGTGGAAGAGCTGCTTCCTTCAACATAATTCCCAGCAGCACTGGAGCTGCTAAGGCTGTTGGAAAAGTTCTTCCCGTGCTGAATGGCAAATTGACTGGAATGTCTTTTCGAGTCCCTACTGTGGATGTTTCAGTTGTTGACCTCACTGTCCGGCTAGAGCAGAAGGCAACCTACGAGCAGATCAAAGCTGCTATCAAGGAGGAATCAGAGGGCAAGCTAAAGGGAATTTTGGGTTACACTGAAGATGATGTGGTGTCTTCTGACTTTGTTGGTGACAGCAGGTCAAGCATATTTGATGCCAAGGCCGGAATTGCTTTGAATGATAACTTTGTAAAGCTAGTTTCGTGGTATGACAACGAATGGGGTTACAGTACTCGAGTGGTCGATTTAATTGCCCACATAGCATCCGTTGCTTAA 1092 0.4661 MLKNPDIPLFHEASDKKIKIGINGNSFSFVLYDVIGFGRIGRLVARVALQRHDVELVAINDPFITTDYMRYMFKYDTVHGQWKHYDLKVKDSKTLLFGEKPVAVYGIRNPAEIPWAEAGAEFVVESTGVFTDKEKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEKEYKPELDIVSNASCTTNCLAPLAKVINDRFGIVEGLMTTVHAITATQKTVDGPSNKDWRGGRAASFNIIPSSTGAAKAVGKVLPVLNGKLTGMSFRVPTVDVSVVDLTVRLEQKATYEQIKAAIKEESEGKLKGILGYTEDDVVSSDFVGDSRSSIFDAKAGIALNDNFVKLVSWYDNEWGYSTRVVDLIAHIASVA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0110 363 SMART gp_dh_n_7 18 180 IPR020828 GO:0051287
Glsi02g0110 363 NCBIfam glyceraldehyde-3-phosphate dehydrogenase, type I 35 354 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Glsi02g0110 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 33 200 IPR036291 -
Glsi02g0110 363 FunFam Glyceraldehyde-3-phosphate dehydrogenase 30 190 - -
Glsi02g0110 363 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 179 342 - -
Glsi02g0110 363 FunFam Glyceraldehyde-3-phosphate dehydrogenase 179 344 - -
Glsi02g0110 363 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 174 192 IPR020831 GO:0016620
Glsi02g0110 363 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 258 275 IPR020831 GO:0016620
Glsi02g0110 363 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 298 313 IPR020831 GO:0016620
Glsi02g0110 363 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 139 152 IPR020831 GO:0016620
Glsi02g0110 363 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 201 217 IPR020831 GO:0016620
Glsi02g0110 363 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 185 342 IPR020829 GO:0016620
Glsi02g0110 363 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 17 360 IPR020831 GO:0016620
Glsi02g0110 363 PIRSF GAPDH 16 363 IPR020831 GO:0016620
Glsi02g0110 363 Gene3D Dihydrodipicolinate Reductase; domain 2 179 344 - -
Glsi02g0110 363 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 178 185 IPR020830 GO:0016620
Glsi02g0110 363 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 35 133 IPR020828 GO:0051287
Glsi02g0110 363 Gene3D - 34 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0110 Glsi-ChrGlsi02 753885 756822 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0110 02 753885 756822 Glsi02g0110 02 753885 756822 ECH