Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0108 ATGCCTCCCTCGTACTTCCCGCTTCGCTGGGAGAGCACCGGAGATCAATGGTGGTATGCATCTCCCATTGATTGGGCTGCTGCGAATGGCCTCTACGATTTGGTCACGGAGCTTCTCCACCTTGACACCAACCTCCTTATTAAGCTCACCTCCCTTCGTCGAATTCGCCGCCTTGAAACCGTGTGGGACGACGAAGCTCAGTTCGATGATGTCGCTAAATGTCGCTCTAAAGTTGCGAGGAATCTTTTGCTAGAGTGCGAATCAGGGAGAGGGCATAACTCTCTCATTCGAGCTGGCTACGGTGGGTGGCTTCTCTACACTGCTGCCTCTGCTGGGGATGTGGATTTTGTTCGGGAATTGTTAGAAAGAGACCGGTTTCTGGTGTTCGGAGAAGGAGAGTATGGAGTCACTGACATACTATATGCTGCAGCCAGGAGCAAGAACTCCGAGGTCTTCAATATCCTGCTTGATTTTGCCCTCTCGCCAAAAGATTGCCGTGGCACTGGAGCAGAATTGGAGGAGCAATTAGATGAAAGTGTTCGGATTTTCAAGAGTGACATGATGAACAGGGCCATTCATGCTGCCGCGAGAGGAGGAAACTGGGAGATATTGAAGCAGCTTCTCGGAAGTGCTTCCGACATTCTAGCCTATAGAGATGCCCAAGGATCTACACTTTTGCACACAGCAGCTGGCAGAGGGCAGGTTGAGGTGGTGAAAAATCTAGTAGAATCATCAGAAATTATCACCTCAACAGATGCACAAGGGAACACAACCTTACATGTGGCTTCTTACAGGGGTTACTTACCTGTGGTAGAGATCCTGATTCTTGCCTGTCCTTCATTGGCATTGTTAACCAATCACTGTGGAGACACTTTTCTTCATATGGCTGTGGCTGGGTTCAGAAGCCCAGGTTTCCGTAGACTGGACAAGCATACTGAGCTAATGAAGCAAGTGGTAAGTGGAAAGATTGTGAGCATGCAGGACATTATCAATGTCAGGAATAATGATGGAAGAACAGCTCTTCATGTGGCTGTGATTGATAACGTCCAATGTGATGTAGTGGAATTATTAATGTCTGTTCCGTCAATTGATTTAAACATTCGTGATGCTGATGGGATGACCCCTTTGGATATTCTGAAGCAAAGACCACAATCAGCATCTTCTGAAATTTTGATCAAGCGGTTGATTTCGGCTGGGGGCATATCTAATCTTCCGGATTATACAGTAAGGAGTGCCCTTCTTTCCCATCTGAAAACCCATGGTATTGGAAGGAGTCCAGGAACCTCTTTTAGAATACCAGATGCAGAGATATTTCTGTACACAGGCATTGAGAATGCATCTGATACCGACTACGACCAGGCAAGTGTGAAATCCAATTCTTGCTCAGGTGAACTTAGCAATTCTGAGTCTGCCAACTCCCCCTATAACAGCAAGACTGATTCTGTTAATTGTGCCACAAGGCGCTTAAAGTTTCTTCTGCGGTGGCCTAGGAGGAAAGACAGAGAAGCAGCTGCCTCAAAGCTGGAAGAAGATGATGATTCTGTGGATTCTTTCAGTTCAAGTAAAAATTTGGAAGACTTTCCAATCCCATTACGGCAAAGATACTCAAAACTATGTTCCCTTCCAAACAACAAAAGAACACTATCTATTAGGACTTACCTTCCAAGTCCATCGACCAAAAAGAAATTTAGTGCAGGCCTAATGCAAGGCGTAATTCAGGTAAAGCCGCATGCTTCTTCACCTCCTATTCATTTTCTAGGGTCGTCTGTGGCTTCACTTTCTTCCGTCGATAAACAAAAGGGTGGGCATATCTTGGGACCCTCTTGCTCCAATCGATCGACAGGTGACGATACACTACAGCTAAACTATAAACAGGGTTCCTTCAATAAGAAATTGATGAATCGGTATCTGTCTTTTGGAGCACAAAGCTTGGCTGCGGAGGATTCAAATAACTGCACAAGGTCTAACTGGAGTTATAAGCGTTTCAGTTCTTTGGTTTTGTAA 2004 0.4566 MPPSYFPLRWESTGDQWWYASPIDWAAANGLYDLVTELLHLDTNLLIKLTSLRRIRRLETVWDDEAQFDDVAKCRSKVARNLLLECESGRGHNSLIRAGYGGWLLYTAASAGDVDFVRELLERDRFLVFGEGEYGVTDILYAAARSKNSEVFNILLDFALSPKDCRGTGAELEEQLDESVRIFKSDMMNRAIHAAARGGNWEILKQLLGSASDILAYRDAQGSTLLHTAAGRGQVEVVKNLVESSEIITSTDAQGNTTLHVASYRGYLPVVEILILACPSLALLTNHCGDTFLHMAVAGFRSPGFRRLDKHTELMKQVVSGKIVSMQDIINVRNNDGRTALHVAVIDNVQCDVVELLMSVPSIDLNIRDADGMTPLDILKQRPQSASSEILIKRLISAGGISNLPDYTVRSALLSHLKTHGIGRSPGTSFRIPDAEIFLYTGIENASDTDYDQASVKSNSCSGELSNSESANSPYNSKTDSVNCATRRLKFLLRWPRRKDREAAASKLEEDDDSVDSFSSSKNLEDFPIPLRQRYSKLCSLPNNKRTLSIRTYLPSPSTKKKFSAGLMQGVIQVKPHASSPPIHFLGSSVASLSSVDKQKGGHILGPSCSNRSTGDDTLQLNYKQGSFNKKLMNRYLSFGAQSLAAEDSNNCTRSNWSYKRFSSLVL 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0108 667 Pfam Ankyrin repeats (3 copies) 192 275 IPR002110 GO:0005515
Glsi02g0108 667 SUPERFAMILY Ankyrin repeat 105 393 IPR036770 -
Glsi02g0108 667 ProSiteProfiles Ankyrin repeat region circular profile. 221 243 - -
Glsi02g0108 667 Pfam Ankyrin repeats (many copies) 331 378 IPR002110 GO:0005515
Glsi02g0108 667 ProSiteProfiles Ankyrin repeat profile. 254 275 IPR002110 GO:0005515
Glsi02g0108 667 ProSiteProfiles Ankyrin repeat region circular profile. 254 275 - -
Glsi02g0108 667 MobiDBLite consensus disorder prediction 451 480 - -
Glsi02g0108 667 ProSiteProfiles Ankyrin repeat profile. 221 253 IPR002110 GO:0005515
Glsi02g0108 667 Gene3D - 12 419 IPR036770 -
Glsi02g0108 667 PANTHER ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED 4 414 - -
Glsi02g0108 667 SMART ANK_2a 254 283 IPR002110 GO:0005515
Glsi02g0108 667 SMART ANK_2a 336 367 IPR002110 GO:0005515
Glsi02g0108 667 SMART ANK_2a 371 404 IPR002110 GO:0005515
Glsi02g0108 667 SMART ANK_2a 221 250 IPR002110 GO:0005515
Glsi02g0108 667 SMART ANK_2a 18 47 IPR002110 GO:0005515
Glsi02g0108 667 SMART ANK_2a 100 129 IPR002110 GO:0005515
Glsi02g0108 667 SMART ANK_2a 187 216 IPR002110 GO:0005515
Glsi02g0108 667 SMART ANK_2a 288 328 IPR002110 GO:0005515
Glsi02g0108 667 SMART ANK_2a 134 164 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0108 Glsi-ChrGlsi02 747036 749967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g0108 193 378 Miscellaneous Gene Families AT2G31820 35.294 1.08e-19 91.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0108 02 747036 749967 Glsi02g0108 02 747036 749967 ECH