Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi02g0099 | ATGAAACTGCTTCCGAGAGAGATGGACAAGCTGTGCCTGCACAATGCTGGCTACATTGCCCAAAAACGTCTTGCTCGTGGGTTAAAACTCAATTATACTGAAGCTGTCGCTCTCATATCCACACAGATTTTGGAATTTGCTCGTGATGGTGAAAAGAGTGTTGCAGAATTAATGGACATTGGGAGATTCCTCTTAGGAAGGAGACAAGTTCTTCCAGCCGTGCCACATCTATTGGATGCTGTACAGGTTGAAGCTACCTTCCCTGATGGGACTAAGTTAATCACCATTCATGATGCAATTGCTTGTGAGAATGGTAACCTTGAACTAGCATTACATGGTTCTTTTCTTCCAGTACCTTCACTTGACAAGTTTCCCTCAACAGAAGATAGTAGAATACCTGGTGAAATAATTTTTGGAGGTGGAAATCTGATTCTTAACTCTGGGAGGAAAACAGTAATTCTCAGAGTTGTCAACACTGGAGACAGGCCAATACAGGTTGGCAGCCACTATCACTTCATTGAAGTGAATCCGTCCTTAGTATTTGATCGAAGGAAAGCATATGGCATGCGCCTCAATATAGCTGCAGGGACTGCTACACGCTTTGAGCCAGGGGAAAGTAAGAGTGTTGTACTTGTAAGCATTGGAGGCAACATAGCCATCAGAGGAGGACATGGCATTGCTGATGGCCCAGTTAATGATTCTAATTGCAAGGCAGCCATGGAGGCTGTAGGCACAAGGGGATTTGGACACATGGAAGAGAAAAATGCAAGTGAAGCTGTCACTGGAGAAGACTCTTCGGTCACCACAGTAATTGGTCGTGAGAAATATGCTAACATGTACGGTCCTACTACTGGTGACAAAATCCGTCTTGGTGACACTGACTTGTTTGCTGAAATTGAAAAAGATTTTTCTGTATATGGTGAAGAATGTGTTTTTGGAGGTGGCAAAGTAATAAGAGATGGAATGGGTCAGTCGTGTGGGCATCCACCTGCTGACTCCTTGGATACTGTCATAACAAATGCTGTGATCATTGATTACAGTGGAATAATTAAAGCAGATATTGGTATTAAAGATGGCCTGATTATGTCAATTGGAAAAGCAGGAAATCCAGACATCATGAATGGTGTATTTTGTAATATGACTATTGGGGCCAGCACTGAAGTTATTGCCGGAGAAGGGCTTATTGTAACAGCTGGGGCCATAGATTGTCATGTGCATTTTATATGCCCTCAATTAGTTTACGAAGCCATATCAAGTGGTATCACAACATTAGTGGGAGGTGGAACAGGACCAGCTGATGGAACACGTGCTACAACTTGTACACCAGCACCAATTCAGATGAGATTAATGCTGCAATCAACAGATGATCTGCCGCTGAACTTTGGTTTTACTGGGAAAGGGAATTGTTCCAAGCCTTCTGAACTACAAGAAATAATCAGAGCTGGAGCTATGGGACTGAAGCTGCATGAAGACTGGGGAAGTACACCAGCTGCAATTGACAGTTGTTTGACTGTTGCAGAACAATATGACATCACGGTTAATATACATACTGACACTTTAAATGAAGCTGGATTTGTGGAACATACAATTGCTGCATTTAAAGGAAGAACTATTCACACTTACCACAGTGAAGGTGCAGGTGGTGGTCATGCTCCAGATATTATCAAAGTATGTGGTGTGAAGAATGTCCTCCCCTCATCAACAAACGCTACACGGCCTTTTACATCAAATACTATAGATGAACATCTTGACATGTTGATGGTTTGCCATCACCTTGATAAGAACATTCCAGAAGATGTAGCTTTTGCAGAATCAAGGATAAGGGCTGAAACAATTGCTGCTGAAGATATTTTGCATGATATGGGGGCAATTAGCATTATATCTTCTGATTCACAGGCTATGGGTCGAATTGGAGAGGTGATATGTAGAACTTGGCAGACTGCCAATAAGATGAAATTACAAAGAGGACAGCTTCAGCCCGGCGAGAACAATGACAACTTTCGAATCAAGCGATATGTTGCAAAATACACTATAAATCCTGCTATAGCGAATGGGTTCTCACAATTTGTTGGTTCAGTCGAGGTGGGAAAGTTAGCTGATCTTGTGATATGGAAGCCATCATTTTTTGGGGCAAAACCAGAAATGATTATCAAAGGTGGTGATGTTGCGTGGGCTAACATGGGCGATCCGAATGCAAGTATCCCCACACCTGAACCGGTGATTATGAGGCCTATGTTCGGTGCATTTGGCAAGGCTGCTAGTGCTCACTCCATTGCTTTTGTGAGCAAGGCAGCATTAGACAATGGAGTTAAAGATTTGTACGGGGTGAAAAAGAGGGTGGAAGCTGTTGGCAATGTGAGGAAGCTCACCAAACTAGACATGAAGCTCAATGACGCACTTCCAAATATCACTGTGGACCCAGAAACATACACTGTTACGGCTGATGGCGAGGTTCTTTCCTGCGCTGCAGCCACTGCTGTTCCCCTTTCTCGCAACTACTTCCTCTTTTAA | 2511 | 0.4321 | MKLLPREMDKLCLHNAGYIAQKRLARGLKLNYTEAVALISTQILEFARDGEKSVAELMDIGRFLLGRRQVLPAVPHLLDAVQVEATFPDGTKLITIHDAIACENGNLELALHGSFLPVPSLDKFPSTEDSRIPGEIIFGGGNLILNSGRKTVILRVVNTGDRPIQVGSHYHFIEVNPSLVFDRRKAYGMRLNIAAGTATRFEPGESKSVVLVSIGGNIAIRGGHGIADGPVNDSNCKAAMEAVGTRGFGHMEEKNASEAVTGEDSSVTTVIGREKYANMYGPTTGDKIRLGDTDLFAEIEKDFSVYGEECVFGGGKVIRDGMGQSCGHPPADSLDTVITNAVIIDYSGIIKADIGIKDGLIMSIGKAGNPDIMNGVFCNMTIGASTEVIAGEGLIVTAGAIDCHVHFICPQLVYEAISSGITTLVGGGTGPADGTRATTCTPAPIQMRLMLQSTDDLPLNFGFTGKGNCSKPSELQEIIRAGAMGLKLHEDWGSTPAAIDSCLTVAEQYDITVNIHTDTLNEAGFVEHTIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGVKNVLPSSTNATRPFTSNTIDEHLDMLMVCHHLDKNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVICRTWQTANKMKLQRGQLQPGENNDNFRIKRYVAKYTINPAIANGFSQFVGSVEVGKLADLVIWKPSFFGAKPEMIIKGGDVAWANMGDPNASIPTPEPVIMRPMFGAFGKAASAHSIAFVSKAALDNGVKDLYGVKKRVEAVGNVRKLTKLDMKLNDALPNITVDPETYTVTADGEVLSCAAATAVPLSRNYFLF | 836 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi02g0099 | 836 | CDD | Urease_beta | 132 | 231 | IPR002019 | GO:0035550|GO:0043419 | |
| Glsi02g0099 | 836 | Gene3D | - | 4 | 124 | IPR036463 | GO:0016151|GO:0043419 | |
| Glsi02g0099 | 836 | ProSitePatterns | Urease active site. | 587 | 603 | IPR017950 | GO:0009039 | |
| Glsi02g0099 | 836 | Gene3D | - | 399 | 817 | - | - | |
| Glsi02g0099 | 836 | Pfam | Urease beta subunit | 133 | 229 | IPR002019 | GO:0035550|GO:0043419 | |
| Glsi02g0099 | 836 | CDD | Urease_gamma | 5 | 100 | IPR002026 | GO:0016151|GO:0043419 | |
| Glsi02g0099 | 836 | PANTHER | UREASE | 1 | 836 | - | - | |
| Glsi02g0099 | 836 | Hamap | Urease subunit alpha [ureC]. | 269 | 836 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Glsi02g0099 | 836 | Gene3D | Urease, subunit C, domain 1 | 269 | 749 | IPR011059 | GO:0016810 | |
| Glsi02g0099 | 836 | NCBIfam | urease subunit beta | 132 | 232 | IPR002019 | GO:0035550|GO:0043419 | |
| Glsi02g0099 | 836 | CDD | Urease_alpha | 271 | 835 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Glsi02g0099 | 836 | Gene3D | Urease, beta subunit | 149 | 268 | IPR036461 | - | |
| Glsi02g0099 | 836 | Pfam | Urease, gamma subunit | 1 | 100 | IPR002026 | GO:0016151|GO:0043419 | |
| Glsi02g0099 | 836 | NCBIfam | urease subunit gamma | 1 | 101 | IPR002026 | GO:0016151|GO:0043419 | |
| Glsi02g0099 | 836 | FunFam | Urease | 149 | 267 | - | - | |
| Glsi02g0099 | 836 | SUPERFAMILY | Urease, beta-subunit | 132 | 260 | IPR036461 | - | |
| Glsi02g0099 | 836 | SUPERFAMILY | Composite domain of metallo-dependent hydrolases | 678 | 748 | IPR011059 | GO:0016810 | |
| Glsi02g0099 | 836 | NCBIfam | urease subunit alpha | 271 | 836 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Glsi02g0099 | 836 | Pfam | Urease subunit beta-alpha linker domain | 231 | 264 | IPR040881 | - | |
| Glsi02g0099 | 836 | Pfam | Urease alpha-subunit, N-terminal domain | 271 | 389 | IPR011612 | - | |
| Glsi02g0099 | 836 | SUPERFAMILY | Urease, gamma-subunit | 1 | 104 | IPR036463 | GO:0016151|GO:0043419 | |
| Glsi02g0099 | 836 | ProSitePatterns | Urease nickel ligands signature. | 397 | 410 | IPR029754 | GO:0016151 | |
| Glsi02g0099 | 836 | SUPERFAMILY | Composite domain of metallo-dependent hydrolases | 270 | 447 | IPR011059 | GO:0016810 | |
| Glsi02g0099 | 836 | FunFam | Urease subunit alpha | 4 | 124 | - | - | |
| Glsi02g0099 | 836 | Hamap | Urease subunit beta [ureB]. | 131 | 231 | IPR002019 | GO:0035550|GO:0043419 | |
| Glsi02g0099 | 836 | ProSiteProfiles | Urease domain profile. | 399 | 836 | IPR017951 | GO:0006807|GO:0009039|GO:0016151 | |
| Glsi02g0099 | 836 | PRINTS | Urea amidohydrolase (urease) protein signature | 604 | 620 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Glsi02g0099 | 836 | PRINTS | Urea amidohydrolase (urease) protein signature | 670 | 685 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Glsi02g0099 | 836 | PRINTS | Urea amidohydrolase (urease) protein signature | 696 | 709 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Glsi02g0099 | 836 | PRINTS | Urea amidohydrolase (urease) protein signature | 565 | 582 | IPR005848 | GO:0006807|GO:0009039|GO:0016151 | |
| Glsi02g0099 | 836 | Pfam | Amidohydrolase family | 395 | 719 | IPR006680 | GO:0016787 | |
| Glsi02g0099 | 836 | SUPERFAMILY | Metallo-dependent hydrolases | 399 | 836 | IPR032466 | - | |
| Glsi02g0099 | 836 | PIRSF | Urease | 1 | 836 | IPR008221 | GO:0006807|GO:0009039|GO:0016151 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Glsi02g0099 | 02 | 675749 | 684184 | Glsi02g0099 | 02 | 675749 | 684184 | ECH |