Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g0098 ATGACGGTGTTCGTAAATTCGAGCTCAGGGCTTCGAAAACAGGTCTTTCCCATTGACTACGAAACGGAGGTGTCGCAGCCTCTCGTCGACGCTGCTCATTTCGGCGACACCGACGCTGCCTTTGAATGTATTGCCAATCCTTTCGTGGACGTTAACTTCATTGGAACGGCGAACTTCAAGTCCAAAACGACGGAGATTGTGTTGCACGATGATTCACCTCACGAAGTCCGCTTCGGATACGAGGAGTTCAAGACCGAGGTCACTGCTCTGTTTCTGGCTGCTCATTCTGGGAATTTGACACTCCTCAGAAAGCTACTGAATGTTGGAGCTAATGTGAATTTGAGATTGTTCCGGGGATATGCCACAACAGCAGCAGTGAGGGAAGGCCATCTAAAAGTATTGGAGATACTTATCAATGCTGGAGCGTCTCAGCTGGCATGCGAGGAGGCTTTGATGGAAGCAAGCTACCTGGGGCGGGCCAGATTTGCTGAGCTACTCATGCAGTCCAACATGATACGTCCTCAGGTTGCTGTTCATGTCCTTGTCTCTGCTTGTTGCAGAGGATTCACCGAGGTTGTTGATGTACTCGTCAAGCATGGAGTGGATGCCAATGCCATTGATAGGACCTTGCTTCAATCTTCAAAGCCATTTCTTCACGCTAATGTTGATTGCAATGCATTGTTCGCTGCTGTTGTCAGCAGGCAGATTGATGTAGTTAGAATGCTTTTGCAGGTTGGTGTAAGGACAGATATCGAGGTCAAACTGGGGGCTTGGACATGGGAAACTGATACAGGAGAAGAATTTCGTGTAGGTGTGGGATTAGCTGATGCTTATCCAATCACCTGGTGTGCTGTGGAATATTTTGAAGCTAGTGGAGCAATATTGCAAATGCTGCTATGCCACCTCTCGCCCAACAGTTTGCACTTTGGAAGGACTCTTTTGCACCATGCCATCCTTTGTAACAACGAAAAAGCGGTAAATGTACTCCTAAGTTGCAGTTCAGATGCAGAAGTGGCAGTGCAAACGATTGAGGAAACCGATTTACGCCCCATTCACATGGCTGCACGGCTTGCATCATGCAACATTCTTCGTTGTCTAATCAATGCTTGTTGTAACTTAGACTCCCAAACAAGATCTGGAGATACGGCATTAATGATCTGTACAGGGTATAAGAACGAGAATTGCCTTAGGGTCCTAGCATCAGCAGGTGCTGATCTGGGGCTGGTAAATTCATCTGGTCACTGTGCATCCACAACTGCAAAGTCTGTTCAGTGGACTAATATTTTCCAGAAATCAATTTTAGACGTAATTCGAGCTGGAAAGGTTGTCAAATCAAGCAATTCCTCCAGATTTTCTGCTTTGATGTTTGTAACTCGTGCAAATGATATAGAGGCTTTGAAGGAACTCATTGAACATCGGAACATAGATCTAGATGAGCAAGATGAAGATGGATTCTCTGCTGCCATGATAGCAGCAGCAGGTGGTAACGTAGAGGCTTTCAGGTTGCTTCTTCATGCGGGGGCTGATGTTCTAAAGCTGAGAAATAGGTATGGTCTGACGGCCCTTAACCTTATAGACGTGAACCTATATGGGAAATTATTTGAAAAAATGATGCTTGAATATGCACTAGAAAAGGGATGCAATGGCTTCTTTGAGCTAAATCCCTTACACCATGCTGCCCGCCATGGGGATGTAGATTTTGTTCGTAAATTAATGAAAAGAGGGTTTGACGTCAATGCTTTTGATGGTCATGGATATACCCCATTGATGTTAGCAGCAAGAGAATGCCGCAGTGAAACGTGTGAGCTTTTGATCTCATGTGGTGCCAAGTGTGATATTCAGAATGAGAGACGTGAGACGGCCCTTCTACTTGCTAGAGAAAATGGTTTAGGAAATGACGCAGAGCGTGTGATATTGGATGAGCTAGCTCGAAGACTAGTCTTGTGTGGGGCTCGCGTTAAGAAGCATACGAAGTGTGGTAAAGGGTCTCCCCATATTAAGCTACTAAGAATGGTGGAGGCCGCTGGACTTTTACGATGGGGAGAATCAAATAAGAGAACTGTAGTTTGTAAAGATGCTGAGGTTGGGCCCAGTGAAAAATTCAGATGGAATCGCAGGAGGAAGTTTGATGTTGACGAGCCCGGAATGTTCCATGTGGTCACTACAAAAAATAAGGCGGTACATTTTGTAAGCGTGGGTGGGGTAGAAATGGCTCAGTTGTGGGTAAGGGGGATTAAATTATTGACCAGAGAAGCCATCTTTAGCAAACGAGCTGATAATATCTGA 2286 0.4554 MTVFVNSSSGLRKQVFPIDYETEVSQPLVDAAHFGDTDAAFECIANPFVDVNFIGTANFKSKTTEIVLHDDSPHEVRFGYEEFKTEVTALFLAAHSGNLTLLRKLLNVGANVNLRLFRGYATTAAVREGHLKVLEILINAGASQLACEEALMEASYLGRARFAELLMQSNMIRPQVAVHVLVSACCRGFTEVVDVLVKHGVDANAIDRTLLQSSKPFLHANVDCNALFAAVVSRQIDVVRMLLQVGVRTDIEVKLGAWTWETDTGEEFRVGVGLADAYPITWCAVEYFEASGAILQMLLCHLSPNSLHFGRTLLHHAILCNNEKAVNVLLSCSSDAEVAVQTIEETDLRPIHMAARLASCNILRCLINACCNLDSQTRSGDTALMICTGYKNENCLRVLASAGADLGLVNSSGHCASTTAKSVQWTNIFQKSILDVIRAGKVVKSSNSSRFSALMFVTRANDIEALKELIEHRNIDLDEQDEDGFSAAMIAAAGGNVEAFRLLLHAGADVLKLRNRYGLTALNLIDVNLYGKLFEKMMLEYALEKGCNGFFELNPLHHAARHGDVDFVRKLMKRGFDVNAFDGHGYTPLMLAARECRSETCELLISCGAKCDIQNERRETALLLARENGLGNDAERVILDELARRLVLCGARVKKHTKCGKGSPHIKLLRMVEAAGLLRWGESNKRTVVCKDAEVGPSEKFRWNRRRKFDVDEPGMFHVVTTKNKAVHFVSVGGVEMAQLWVRGIKLLTREAIFSKRADNI 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g0098 761 Gene3D - 298 429 IPR036770 -
Glsi02g0098 761 ProSiteProfiles Ankyrin repeat profile. 483 515 IPR002110 GO:0005515
Glsi02g0098 761 ProSiteProfiles Ankyrin repeat profile. 584 616 IPR002110 GO:0005515
Glsi02g0098 761 ProSiteProfiles Ankyrin repeat region circular profile. 584 616 - -
Glsi02g0098 761 SMART ANK_2a 449 479 IPR002110 GO:0005515
Glsi02g0098 761 SMART ANK_2a 176 205 IPR002110 GO:0005515
Glsi02g0098 761 SMART ANK_2a 346 375 IPR002110 GO:0005515
Glsi02g0098 761 SMART ANK_2a 483 512 IPR002110 GO:0005515
Glsi02g0098 761 SMART ANK_2a 379 408 IPR002110 GO:0005515
Glsi02g0098 761 SMART ANK_2a 117 146 IPR002110 GO:0005515
Glsi02g0098 761 SMART ANK_2a 222 253 IPR002110 GO:0005515
Glsi02g0098 761 SMART ANK_2a 551 580 IPR002110 GO:0005515
Glsi02g0098 761 SMART ANK_2a 309 338 IPR002110 GO:0005515
Glsi02g0098 761 SMART ANK_2a 584 613 IPR002110 GO:0005515
Glsi02g0098 761 SMART ANK_2a 85 114 IPR002110 GO:0005515
Glsi02g0098 761 Gene3D - 177 261 IPR036770 -
Glsi02g0098 761 SUPERFAMILY Ankyrin repeat 310 637 IPR036770 -
Glsi02g0098 761 Pfam Ankyrin repeats (3 copies) 538 615 IPR002110 GO:0005515
Glsi02g0098 761 SUPERFAMILY Ankyrin repeat 27 252 IPR036770 -
Glsi02g0098 761 ProSiteProfiles Ankyrin repeat profile. 85 117 IPR002110 GO:0005515
Glsi02g0098 761 ProSiteProfiles Ankyrin repeat region circular profile. 551 582 - -
Glsi02g0098 761 ProSiteProfiles Ankyrin repeat region circular profile. 85 115 - -
Glsi02g0098 761 PANTHER ANKYRIN REPEAT-CONTAINING 22 742 - -
Glsi02g0098 761 Pfam Ankyrin repeats (many copies) 455 504 IPR002110 GO:0005515
Glsi02g0098 761 ProSiteProfiles Ankyrin repeat profile. 551 583 IPR002110 GO:0005515
Glsi02g0098 761 Gene3D - 537 672 IPR036770 -
Glsi02g0098 761 Gene3D - 17 176 IPR036770 -
Glsi02g0098 761 Gene3D - 430 536 IPR036770 -
Glsi02g0098 761 ProSiteProfiles Ankyrin repeat region circular profile. 483 510 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g0098 Glsi-ChrGlsi02 671024 674636 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g0098 02 671024 674636 Glsi02g0098 02 671024 674636 ECH