Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1977 ATGGTTCCGAAATTAGCCAAACTCGGGTCTTTCAGGCACAGTTTTGCAGAGAAGAGGGAGCGGTTGCTCTCCATAAAGGGTGGCTATTCCCAGGTAGGGATTCCTATTCCGGAATTAGACGAAGATGAACAGCGAAGGAGGTGTTGTACTTATCGTGCGTTCTCCGATGGGATTATCAACGGCTGGAGGACACTGCAGAGGGTTGCTGCTACGGCCTGGGAGATGGGTCGGTCTGATCCCAGGAAGATTGTGTTCTCTGCGAAAATGGGTCTTGCGTTGATTATCATCTCCTTGTTGATTTTCTTGAAAGAACCCTTCAAGGACATGAGTCGATATTCCGTTTGGGCTATACTAACTGTTGTGGTTGTGTTTGAATTCAGTATAGGGGCAACTCTGAGCAAAGGGTTTAACAGAGGATTGGGGACTTTGTCAGCTGGAGGACTGGCTTTGGGAATGGCAGAATTATCAGAATTGGCAGGAGAGTGGGAGGAAACTATAGTTATTCTTAGTATCTTTACTGTAGGATTTTGTACCACCTATGCCAAACTATATCCAACGCTGAAGCCTTACGAATATGGGTTCCGTGTGTTCTTGATCACGTATTGTTATGTTACAGTATCTGGGTATCGAACTGGGGAATTTGTTCAGACAGCTATTAATAGGTTTTTGCTCATTGCAATTGGTGCTGGTGTTTCTTTGGGAGTAAATATGTGTATATATCCAATATGGGCTGGTGAAGATCTACACAATCTGGTGGCTAAAAATTTTATGGGTGTTGCAACATCTTTGGAAGGTGTTGTGAATAACTACCTTAATTGTATTGAATATGAGAGGGTGCCTTCAAAAATTCTTACTTACCAGGCTGCTACTGATGACCCAGTTTACAGTGGCTACAGATCAGCTGTTGAATCTATTAGCCAAGAGGATGCATTGATGGGATTTGCTGTGTGGGAGCCACCTCATGGTCGTTACAAAATGCTTAAATATCCATGGAAGAATTATGTGAAAGTAAGTGGGGCACTAAGGCATTGTGCATTTACGGTCATGGCTATGCATGGATGTATACTTTCTGAAATACAGGCCCCAGCTGAGAAAAGACAAGTTTTCTGTAGTGAACTTCAGAGGGTAGGCTTTGAAGGGGCCAAAGTATTGCGTGAACTTGGAAACAAAGTTAAGAAGATGGAGAAACTAGGTCAAGTGGACATTCTGTATGAAGTACATGAGGCGGCAGAAGACTTGCAACAGAAGATTGACAAAAAATCTTACCTTCTTGTATATTCAGAGTTCTGGGAAATTGGGAACCGGCCAATAAAGCAGCATGATCCCCGTGACCTCTTGAACGTGGATGAAGAAAGAAAATTTCTTGAGTACAAGTCTCTCAGTGAAGCTGTGCTTGATCTCAGATCAGTTCATATTTCTCCTGATTTCAACCCTTCAGTGTCTGCAGCTGTTACCTCGGAAAGCATGTTCAGGAGACAGGTATCTTGGCCTGCACATATTTCCTTTAAAGCAGATGCAGTGACAATGAAAGAAGAATCAAAAACTTATGAAAGCGCTAGTGCACTGTCTCTAGCAACATTTACATCCCTTCTGATTGAATTTGTAGCAAGGCTCCAGAACCTAGTTGATTCATTCGAAGAACTAGGTGAGATAGCAAAGTTTAAGGATCCTCTTGAGCAGCAAGAGACAGTAAGTGGGTTTTGGACAAGATTGTGTGACTGCATGAATTTCAAGCATTAA 1740 0.4276 MVPKLAKLGSFRHSFAEKRERLLSIKGGYSQVGIPIPELDEDEQRRRCCTYRAFSDGIINGWRTLQRVAATAWEMGRSDPRKIVFSAKMGLALIIISLLIFLKEPFKDMSRYSVWAILTVVVVFEFSIGATLSKGFNRGLGTLSAGGLALGMAELSELAGEWEETIVILSIFTVGFCTTYAKLYPTLKPYEYGFRVFLITYCYVTVSGYRTGEFVQTAINRFLLIAIGAGVSLGVNMCIYPIWAGEDLHNLVAKNFMGVATSLEGVVNNYLNCIEYERVPSKILTYQAATDDPVYSGYRSAVESISQEDALMGFAVWEPPHGRYKMLKYPWKNYVKVSGALRHCAFTVMAMHGCILSEIQAPAEKRQVFCSELQRVGFEGAKVLRELGNKVKKMEKLGQVDILYEVHEAAEDLQQKIDKKSYLLVYSEFWEIGNRPIKQHDPRDLLNVDEERKFLEYKSLSEAVLDLRSVHISPDFNPSVSAAVTSESMFRRQVSWPAHISFKADAVTMKEESKTYESASALSLATFTSLLIEFVARLQNLVDSFEELGEIAKFKDPLEQQETVSGFWTRLCDCMNFKH 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1977 579 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 58 560 - -
Glsi01g1977 579 Pfam Aluminium activated malate transporter 73 549 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1977 Glsi-ChrGlsi01 83183473 83187081 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1977 6 557 Miscellaneous Gene Families AT3G18440 64.983 0.0 724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1977 01 83183473 83187081 Glsi01g1977 01 83183473 83187081 ECH