Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1943 ATGTCCGGCTCCGGTGGGGTTTCAGTTGCCGACAACCGCTGCCGGAATCGTTACCTGTGTGGAAACCGATTCTACAACCCACTACCCTTGCGGAAACACAGACGGGAGCAGCACCACAAGCATAGCTTCTCCAGAACTTGTTCCTCAATTGCGTTGGAAAACAAACTGCCGTCTTCCGATGTTTCGATTTCTTCTCACAGTACAAGGAACGTCTCTAATTTGGATAGATTCTTGGAGTATATTACGCCAGTAGTTTCAGCTCAGTATTTTCCCAAGACAAGCACGAGGAGATGGAAAACAAGGGAGACAGAGTTACATCCATACTTTGTGCTTGGGGACCTGTGGGATTCCTTTCAAGAATGGAGTGCATATGGTGCTGGTGTTCCTTTGGTGTTGAATGGGAGTGACTCCGTCACACAGTATTACAATGTCTCCTTGTCTGCCATTCAGCTATATATTGACCCATCAAGACCTTCCCCGGCATTAAGGAGACCCGGTGAGGAGAGTGACTGTGAATCAGCTAGAGAGACAAGCAGTGATATCAGTAGAGCCTATGATCATGAAAGAGGAACAGACGGTGTAGTTCATGGCAATTGGAACCTGCTTAACATTACAGATGCAGGCAATTATGGTCTAGAAGGAGTCTCACTCAGAAATAAAACTTTCATAGGTTCATCAAAATCAAGAGATGAGAGTGAGAGTTGCCACTCATCTGGTCAACTTATATTTGAATACTTTGAGCGTGAGACGCCTTATAATCGTGAACCATTAGCAGATAAGATTTCTGAACTTGCACATCAATTTCCGGAGCTGACGACATACAGGAGCTGTGATCTTTCTCCTTCGAGTTGGGTTTCGGTGGCATGGTATCCAATATATAGAATACCTACAGGACCAACACTACAGAGTCCCAGTTCCTGCTTCCTGACCTTCCATTCTCTGTCAACAGCTTTTCAAAATCCAAATTCTGATGGGCTTCGTTTTCATTATTCAAGTAGTAGGAGCATGTCATCCAAGATATCATTACCAATCTTTGGGCTTGCCTTTCACAAGTTCAAAGCTTCTGTCTGGGATCCTGATAGTGTTTATGCATGTCAGAAAGCCAATTCTCTGTTGCGAGCTGCTGATAACTGGCTTAGGTCACTACGAGTTTACCATCCTGATTATAATTACTTCATGTCCCATTATCCATATTGGACATGA 1203 0.4422 MSGSGGVSVADNRCRNRYLCGNRFYNPLPLRKHRREQHHKHSFSRTCSSIALENKLPSSDVSISSHSTRNVSNLDRFLEYITPVVSAQYFPKTSTRRWKTRETELHPYFVLGDLWDSFQEWSAYGAGVPLVLNGSDSVTQYYNVSLSAIQLYIDPSRPSPALRRPGEESDCESARETSSDISRAYDHERGTDGVVHGNWNLLNITDAGNYGLEGVSLRNKTFIGSSKSRDESESCHSSGQLIFEYFERETPYNREPLADKISELAHQFPELTTYRSCDLSPSSWVSVAWYPIYRIPTGPTLQSPSSCFLTFHSLSTAFQNPNSDGLRFHYSSSRSMSSKISLPIFGLAFHKFKASVWDPDSVYACQKANSLLRAADNWLRSLRVYHPDYNYFMSHYPYWT 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1943 400 PANTHER T15D22.8 35 396 - -
Glsi01g1943 400 MobiDBLite consensus disorder prediction 161 181 - -
Glsi01g1943 400 ProSiteProfiles Zinc finger C2H2 type domain profile. 12 46 IPR013087 -
Glsi01g1943 400 MobiDBLite consensus disorder prediction 157 181 - -
Glsi01g1943 400 Pfam Protein of unknown function (DUF789) 72 392 IPR008507 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1943 Glsi-ChrGlsi01 82839234 82841591 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1943 01 82839234 82841591 Glsi01g1943 01 82839234 82841591 ECH