Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1918 ATGTATGAGTTGCTTAATTTTAGACTTCATTGTTTTTTCCCAAGATATAGAATTCGTGCAAGTTCGGTCTCTCCTATTCACCATAGAGTAAATCATTGTTATAGTTCTGATTATAATCACTGGACACGAAGCCGTGGATATGGTGGTGGGAGAGATCCTGATAGATATCAAGACCCTTCACCTCCTTATAGTCGAGGAAGAATACATGGCAGGCCAATTGGTAGATTTTTTGATGGGCCTGGCTATGGTCCTAAACTAGTCAAAGCGCACTCAGAGAAAACCGGGATAGATAGACAACACATTCGAATTGCGCCCGTTTCGAGAATCTTACTCTTTAAAAACGCAGTGTCTCTCTCTATTGTCTCTCGGAACAATTCGATGGCAGATCAGACCCAGAAAGCAGAGCTCTTTGAGCTCAACAATGGGACCATGCAGGTCCTCATCACCAATGTCGGCTGCACAATCACTTCCTTGTCTGTGCCCGGCAAAGATGGAAAGTTGTCTGATGTTGTTCTTGGGTTCGACTCTATTGAACCATATCAGAATGGTCTTGCTCCTTATTTTGGCTGCATTGTGGGTCGGGTTGCGAACAGAATTAAAGATGGGAAGTTTACACTTGACGGGATTCAATACTCGTTACCCATCAACAATCCCCCAAACAGTCTCCATGGTGGTCATATAGGGTACGATAAGAAGGTGTGGGAGGTAGTTGAATATAAGAAAGGCGAAACACCTTCAATCACTTTTAAGTATAACAGTCATGATGGGGAGGAAGGTTATCCTGGGGATATTAGTGTTACTGCAACTTACACACTCACCTCGAGCACAACTCTAAGGCTTGACATGGAAGGAGTGCCGAAGAACAAGCCCACACCGATTAACTTGGCTCAGCATACTTACTGGAACTTAGCTGGCCACAACTCAGGGAATATACTTGACCATTCAATTCAGATATGGTCTAATCATGTCACTCCTGTGAATAAGAATACTGTACCCACTGGTGAAATCATGCCAGTGAAGGGTTCCCCCTTTGATTTTACATCTGAGAAGAGGATAGGCAACACCATCAATGAGGTTGGAATAGGATATGACCACAATTATGTGCTTGATTGTGGGGATGAGAAAGCGGGATTGAAACATGCTGCGAAAGTGAGGGACCCCACGAGTTCAAGGGTATTAAACTTGTGGACAAGTGCCCCTGGTATGCAATTTTACACTGGGAATTATGTCAACAATGTTACTGGAAAAGGAGGTGCGGTATATGGAAAGCATGCAGGGTTGTGTCTGGAGACACAGGGATTCCCTGATGCCATAAACCAGCCAAATTTCCCATCAATTGTCGTCCGACCTGGTGAGAAGTACCGACATTCCATGTTGTTTGATTTTTCAGTTGAGTAA 1398 0.4392 MYELLNFRLHCFFPRYRIRASSVSPIHHRVNHCYSSDYNHWTRSRGYGGGRDPDRYQDPSPPYSRGRIHGRPIGRFFDGPGYGPKLVKAHSEKTGIDRQHIRIAPVSRILLFKNAVSLSIVSRNNSMADQTQKAELFELNNGTMQVLITNVGCTITSLSVPGKDGKLSDVVLGFDSIEPYQNGLAPYFGCIVGRVANRIKDGKFTLDGIQYSLPINNPPNSLHGGHIGYDKKVWEVVEYKKGETPSITFKYNSHDGEEGYPGDISVTATYTLTSSTTLRLDMEGVPKNKPTPINLAQHTYWNLAGHNSGNILDHSIQIWSNHVTPVNKNTVPTGEIMPVKGSPFDFTSEKRIGNTINEVGIGYDHNYVLDCGDEKAGLKHAAKVRDPTSSRVLNLWTSAPGMQFYTGNYVNNVTGKGGAVYGKHAGLCLETQGFPDAINQPNFPSIVVRPGEKYRHSMLFDFSVE 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1918 465 Pfam Aldose 1-epimerase 136 460 IPR008183 GO:0005975|GO:0016853
Glsi01g1918 465 MobiDBLite consensus disorder prediction 45 65 - -
Glsi01g1918 465 PANTHER ALDOSE-1-EPIMERASE 130 464 - -
Glsi01g1918 465 CDD galactose_mutarotase_like 136 462 IPR047215 GO:0016853
Glsi01g1918 465 FunFam Aldose 1-epimerase 128 464 - -
Glsi01g1918 465 Gene3D - 114 465 IPR014718 GO:0030246
Glsi01g1918 465 SUPERFAMILY Galactose mutarotase-like 127 463 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1918 Glsi-ChrGlsi01 82639376 82643917 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1918 115 463 Miscellaneous Gene Families AT3G47800 48.711 4.74e-111 330
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1918 01 82639376 82643917 Glsi01g1918 01 82639376 82643917 ECH