Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1853 ATGGAAGGAATGCGGCCAGGGTGGGCTGTGAAGGCTGTCGTTGTTATAATAATCACTTCGATGATGTTCCGATGCGTTTGTGCATCTAACCACTCCGTCGGTGGGCCTACCGGCTGGGACCTCCGTTCCAATCTACAAGCGTGGTCCGCTGCGAACACGTTTCTTGTTGGCGATGATCTAGTGTTCACATACACGCCGATCCACGACGTGGTGGAAGTTGACCAACAAGGTTACAACATGTGCATCATCTCCAACGCCATCGGCACTGACGACAGTGGAGAGACTGTGATCCACCTCACAGAACCAGGACCAAGGTACTTCGTCTGTGGCCGATCAGAGCACTGTCAACAGGGCCTGAAGCTCCAAGTCCAAGTTCTCGCGCAGCCCAACAATGGAACTAGTGGAGGTAATCAGAGTCCGCAACGACGTCCCAGACGCCCTCCAAGATCTCCTCCCAGGCCTCCAACCCCAATACCAATATCTCCTCCTTCGCCTTCAATCCCAATATCCAGACCTCCTCCGCCACATCCTCCACCTGCTGATGGACCTTGTTCATGTTCTGGTGCTAAGGACAGCATGCCGGATGTGCCGTTTCTGTTCCATGGACTAGTGCCAGTGATTACGCTGGCAGCCGTCTCTTTCACCCCCGCTCGTTTCCTTTCCACCTTTTCGCATCTCCTGGTTTTGATCTGA 693 0.5397 MEGMRPGWAVKAVVVIIITSMMFRCVCASNHSVGGPTGWDLRSNLQAWSAANTFLVGDDLVFTYTPIHDVVEVDQQGYNMCIISNAIGTDDSGETVIHLTEPGPRYFVCGRSEHCQQGLKLQVQVLAQPNNGTSGGNQSPQRRPRRPPRSPPRPPTPIPISPPSPSIPISRPPPPHPPPADGPCSCSGAKDSMPDVPFLFHGLVPVITLAAVSFTPARFLSTFSHLLVLI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1853 230 ProSiteProfiles Phytocyanin domain profile. 29 127 IPR003245 GO:0009055
Glsi01g1853 230 MobiDBLite consensus disorder prediction 128 143 - -
Glsi01g1853 230 Pfam Plastocyanin-like domain 42 118 IPR003245 GO:0009055
Glsi01g1853 230 MobiDBLite consensus disorder prediction 150 182 - -
Glsi01g1853 230 FunFam Blue copper 27 131 - -
Glsi01g1853 230 CDD Phytocyanin 30 125 - -
Glsi01g1853 230 SUPERFAMILY Cupredoxins 28 126 IPR008972 -
Glsi01g1853 230 MobiDBLite consensus disorder prediction 128 188 - -
Glsi01g1853 230 Gene3D - 27 130 IPR008972 -
Glsi01g1853 230 PANTHER BLUE COPPER PROTEIN 28 150 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1853 Glsi-ChrGlsi01 82095652 82096856 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g1853 2 126 Miscellaneous Gene Families AT2G32300 38.281 2.90e-29 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1853 01 82095652 82096856 Glsi01g1853 01 82095652 82096856 ECH