Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1702 ATGGAGTTTACTACTTTTGGTTATTGCTACACGTTAAAGCTGGTTGCCACGAAGGCAGGGAATTTTCCTATGGTGGTGCTGGCTGGGTCTGGCTCCTCTTTGCCATTTCATGTAGAGTGGGGAAGTTGGCCCCAAATTGGCAGAGCCACGCTTAATCAGGGAGACACTGCAAGGCATAGACTTGAAATGGCGAAAGGAACTAGACGCTTTTATATAAATCAAACCCTTGTGCTTCGTCTCTCACTACTGGTTAGCTTAGTTGCTATACTTTACTGTTTTGTGTTTGTAACGCTCAGGCCAAAGGAAACTGCTTTGACAATGGCAACCACTGAGATATTTGGGGTCAAGATTGAGAAGAATCCTTCTGAATCCAAACTCACCGAGCTTGGAGTCACATCTTGGCCAAAGTGGGAAGGTAGTCCAACAAAAATTCCATGGTCATTCACAGCCACAGAGACTATGTATCTGTTGGAGGGAAAAGTGAAGGTTACTGTTGATGGACATGATGGATCTTTTGAAATTGGGGGTGGTGATTTAGTTGTCTTCCCTAAAGGAATGAACATCACTTGGGAAGTGACTGAAGCTGTGAAGAAGCACTACAGCTTGGAAAAGTAA 615 0.4423 MEFTTFGYCYTLKLVATKAGNFPMVVLAGSGSSLPFHVEWGSWPQIGRATLNQGDTARHRLEMAKGTRRFYINQTLVLRLSLLVSLVAILYCFVFVTLRPKETALTMATTEIFGVKIEKNPSESKLTELGVTSWPKWEGSPTKIPWSFTATETMYLLEGKVKVTVDGHDGSFEIGGGDLVVFPKGMNITWEVTEAVKKHYSLEK 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1702 204 CDD cupin_TM1112-like 133 202 - -
Glsi01g1702 204 PANTHER OS04G0445200 PROTEIN 101 203 - -
Glsi01g1702 204 Pfam EutQ-like cupin domain 127 200 IPR008579 -
Glsi01g1702 204 SUPERFAMILY RmlC-like cupins 125 200 IPR011051 -
Glsi01g1702 204 Gene3D Jelly Rolls 104 202 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1702 Glsi-ChrGlsi01 78112777 78116238 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1702 01 78112777 78116238 Glsi01g1702 01 78112777 78116238 ECH