Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1683 ATGGCCGCCATTCCCACGCTCTCTTCCTCGCTACCAACGATTTCTCCTCATGCTTCTCCTTCCACCTCTTCAAAGCCCCACCAGCTACCTTATCTTCTCACTCTTAGCTCTCTATTCGGAACCAGAATTACGATTCAGAGCTCAAATTCATGTCGTTTCCTTCCCAATAACAAGTATTGCCGTGCGACATCCTCGACCGTGTCGTTCAGTCTTCCAAATACGAAACCCCAGACCGATACTCCTGAGAAACTCCCAAAATGGTCGGCAAGGGCGATAAAGTCATTTGTAATGGCGGAATTGGAAGCAAGGAAGCTCAAGTATCCGAGTACAGGAACCGAGGCCCTTCTGATGGGTATTTTAGTAGAAGGAACAAGTAAAGCTGCAAAGTTCTTAAGGGCTAACGGAATTACTCTTTTCAAAGTACAAGAAGAAACGGTAGAGCTACTTGGGAAATCTGACATGTATTACTTTAGCCCTGAGCATCCTCCATTGACTGAACCAGCTCAGAAATCCCTTGACTGGGCTGTTGAGGAGAAATTAAAGTCAGGTGAAGGTGGGGAAATAACCGTTGCTCATTTGCTTCTAGGAATTTGGGCACAAGAGGAATCAGCAGGTCACAATATCTTGGCTGCTCTAGGTTTCAATGATGAGAAAGCAAAAGAACTTGCTAATTCTTTCGACGGAGATGTTGATTTGAGCTTCAAGAAGCAAGCTTAA 717 0.4505 MAAIPTLSSSLPTISPHASPSTSSKPHQLPYLLTLSSLFGTRITIQSSNSCRFLPNNKYCRATSSTVSFSLPNTKPQTDTPEKLPKWSARAIKSFVMAELEARKLKYPSTGTEALLMGILVEGTSKAAKFLRANGITLFKVQEETVELLGKSDMYYFSPEHPPLTEPAQKSLDWAVEEKLKSGEGGEITVAHLLLGIWAQEESAGHNILAALGFNDEKAKELANSFDGDVDLSFKKQA 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1683 238 MobiDBLite consensus disorder prediction 1 26 - -
Glsi01g1683 238 SUPERFAMILY Double Clp-N motif 86 225 IPR036628 -
Glsi01g1683 238 PANTHER ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC 5 233 IPR044217 -
Glsi01g1683 238 MobiDBLite consensus disorder prediction 6 26 - -
Glsi01g1683 238 ProSiteProfiles Clp repeat (R) domain profile. 84 229 IPR004176 -
Glsi01g1683 238 Pfam Clp amino terminal domain, pathogenicity island component 98 150 IPR004176 -
Glsi01g1683 238 Pfam Clp amino terminal domain, pathogenicity island component 187 225 IPR004176 -
Glsi01g1683 238 Gene3D - 86 231 IPR036628 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1683 Glsi-ChrGlsi01 77920164 77923244 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1683 01 77920164 77923244 Glsi01g1683 01 77920164 77923244 ECH