Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1682 ATGAGCTTCGCTGCTTACAAGATGATGCACTGGCCAACGGGCATCGAGAATTGCGCTTCTGGGTTCATTACACATTCCCGGGCCGACTTCGTTCCTCGAATCCCTGCGATTCAGACCGATGAGCTTGACGCCGAGTGGCCGGCGAGGCGCGAGGTTGGTCCCATTCCAAACCTCATTGTCACTGCGGCGAATGTTTTGGAAGTGTACATTGTGAGGGTGCAAGAAGAAGGTAGCAGAGAGTCTAAGGGTCATGTAGAATCCAAGCGTGGTGGACTCATGGATGGCCTTACTGGGGCCTCGCTCGAGCTTGCTTGTCATTACAGGTTGCATGGAAATGTTGAAACCATGGCGGTTTTGAGCATTGGAGGTAGTGATGCTTCCAAGAGGAGAGATTCTATCATCATAACTTTTAAAGATGCAAAAATTTCAGTTTTAGAGTATGATGATTCTATTCATGGACTTCGGATAAGCTCTTTGCATTGTTTTGAGGGTCCAGAGTGGCTTCATTTGAAAAGAGGCAGAGAACAATTTGCAAGAGGTCCATTGGTAAAGGTTGATCCTCAAGGCAGGTGTGGTGGAGTTCTTGTCTATGATTTGCAAATGATAATACTTAAGGCTACTCAGGCTGGTTCTGGTTTAGTTGGAGAGGATGATGCCTTGGGTTCTGGAGGCGCAGTTGCTGCTCGTATTGAGTCATCTTATATGATGAATCTACGTGACTTGGATATGAGGCATGTTAAAGATTTTACATTTGTACATGGCTATATTGAACCTGTGATGGTGATCCTGCATGAAAGGGAGCTTACTTGGGCTGGGCGTCTCTCATGGAAGCACCATACTTGCATGATATCTGCACTTAGTATCAGCACAACTTTGAAGCAGCATCCACTCATATGGTCCGCTGTTAATCTTCCCCACGATGCCTACAAGCTTCTTGCAGTGCCTTCTCCAATAGGTGGCGTTCTTGTGTTTGGTGCTAATACTATTCATTATCACAGTCAGTCTGCTTCATGTGCATTGGCCTTGAACAGTTATGCTGTTTCACCTGATAGTAGTCAAGAGATGCCAAGATCAAGTTTCAATGTGGAGCTTGATGCTGCCTATGCAACTTGGTTGTTGAGTGATGTGGCCTTGTTGTCAACAAAAACTGGCGAACTGTTGTTGCTTACTCTTGTTTATGATGGAAGGGTTGTGCAGAGACTTGATCTTTCCAAGTCAAAAGCTTCAGTATTGTCATCTGGTATAACAACACTAGGAAATTCTCTGTTTTTTCTCGCCAGCCGGTTAGGAGACAGTACGCTGGTGCAGTTTTCTAGTGGATCAGGAATTTCAATGCCGTCATCCAATCTAAAGGAAGAGGTTGGCGATATAGAAGGTGATGCTCCTTCAGCAAAGCGACTGCGCAGGTCATCTTCTGATGCTTTGCAAGATATGGTTAGTGGGGAGGAGCTCTCCTTGTATGGATCTACCCCTAATAGAACAGAATCAGCACAGAAAACATTCTCATTTGCTGTGAGGGATTCGCTTATTAATGTTGGTCCTTTGAAAGACTTCTCATATGGTTTAAGGATAAATGCTGACGCAAATGCAACTGGAATTGCTAAACAAAGTAACTATGAATTGGTGTGCTGCTCTGGTCATGGAAAGAATGGTTCACTCTGTGTTCTTCGGCAATCAATTCGCCCAGAAGTGATCACTGAGGTGGAACTTCCTGGTTGCAAAGGAATTTGGACTGTTTATCATAAGAACACACGCTCTCATAATGCTGATTCTTCTAAGCTGGCTGATGATGATGATGAGTATCATGCATATCTAATCATAAGCTTGGAGGCTCGTACTATGGTACTGGAAACAGCTGATCTTCTGAGTGAGGTTACTGAAAGTGTTGACTATTATGTTCAAGGAAAAACAATTGCTGCAGGGAATTTATTTGGAAGGCGTCGAGTAATCCAAGTCTATGAACGCGGTGCTCGAATTCTAGATGGCTCTTTTATGACCCAAGATGTAAGCTTTGCAGCTTCAAACTCTGAAACTAGTTCTGGCTCTGAGAGTGCTATTGTGTTGTCTGTCTCTATAGCTGATCCATATGTCTTACTCAGAATGAGTGATGGAAGTATTCGAATTTTGATTGGAGATCCTACTACCTGCACTGTTTCTGTCACTACACCTTCATTTGAGAACTCAAAAAGATCAGTATCTGCATGTACACTGTACCATGATAAAGGACCTGAGCCATGGCTAAGGAAGACAAGTACTGATGCATGGCTTTCCACTGGTGTTGGTGAGGCAATTGATGGCACTGATGGTGCAACTCAAGATCATGGGGATATTTATTGTGTTGTTTGTTATGAAAATGGTGCCCTTGAAATATTTGATGTGCCAAATTTCAGTTGTGTTTTTTCTGTGGAAAAATTTATGTCTGGAAAGAGTCACCTTGTTGATTCTCTCATGAAGGAGGCATCAAAAGATTCTCAAAAAGTTGATAAAGGTTCTGATGAAGTTACCAATCAAGGAAGGAAGGAAAATGTACAGAATATGAAGGTTGTAGAGTTGGCCATGCAGAGATGGTCAGGAAAGTATAGCCGCCCATTTCTTTTTGGGATTTTGAGTGATGGAACAATTCTTTGTTACCATGGTTACCTTTATGAAAGTCCAGATGGTACTTCCAAAGTCGAGGATTTAGCATCTGCACAAGGACCTGTTGGCCTTAACAGTAATAGTGCTTCTAGGCTTAGAAATTTGAGATTCGTTCGTCTTCCAGTGGACGTATATGCCAGGGAGGAGACATCAAGTGGATCCCCTTGTCAGAGAATTACTATTTTCAAGAACATAGGTGGTTATCAAGGATTCTTCTTATCAGGATCAAGACCAGCTTGGGTTATGGTGTTTAGAGAACGGCTTCGTGTTCATCCACAGTTATGCGATGGGTCTATTGTTGCTTTTACTGTCCTTCACAATGTGAACTGCAATCATGGACTCATATATGTTACATCACAGGGTGCTTTAAAGATCTGCCAGCTGCCTTCTGGCTCAAGCTATGATAACTACTGGCCTGTACAGAAAATTCCGCTAAAAGCCACTCCACATCAAGTAACCTACTTTGCGGAGAAGAATTTGTATCCACTTATTGTCTCAGTTCCAGTTCCTAAGCCACTAAATCAAGTTATTTCATCTCTGGGTGATCAAGAAGTCAACCATCAGACTGAGAGTCAAAATTTGACCTCTGACGAGCAAAACCGCTTTTACACCATTGATGAATTTGAGGTTCGTATTATGGAGCCAGAAAAATCTGGTGGTCCTTGGCAAACAAAGGCAACAATACCTATGCAAAGTTCAGAAAACGCCCTTACTGTGAGAATGGTTACACTTTTGAATACAGATACTAAAGAGAATGAAACGCTTTTAGCTATTGGCACTGCTTATGTGCAAGGAGAAGATGTTGCTGCAAGAGGGCGTGTCCTTCTATATTCTTTGGGAAAAAGCACTGATAATAGTCAAACTCTGGTTTCTGAGGTCTACTCAAAAGAATTGAAGGGTGCTATATCGGCTCTGGCCTCACTTCAAGGCCATATATTAATAGCTTCTGGTCCAAAAATTATTCTGCACAAGTGGACTGGTATTGAGTTGAATGGTATTGCATTTTTTGATGCTCCACCATTACATGTTGTGAGCTTAAATATTGTCAAAAACTTTATCCTTATTGGTGACATCCATAAAAGCATTTACTTTCTTAGTTGGAAGGAACAGGGTGCTCAACTTAGCTTATTAGCCAAGGACTTCGGCTCTCTTGATTGTTTTGCAACTGAGTTTTTGATTGATGGAAGTACTCTGAGTCTCATGGTTTCAGATGATCAAAAGAACATCCAGATCTTTTACTATGCACCAAAGATGTCTGAGAGTTGGAAGGGACAAAAGCTTCTTTCAAGGGCTGAATTTCATGTTGGTACCCACGTGACTAAATTCTTGCGGTTGCAGATGTTGTCCACCTCTTCTGATCGGACTGGCTCTGGTCCAGGCTCTGATAAAACCAATCGTTTTGCTTTATTATTTGGTACCCTCGATGGCAGTGTGGGTTGCGTTGCACCTCTTGATGAAATCACATTTCGTAGACTGCAATCCTTACAGAGAAAGCTTGTTGATGCTGTACCCCATGTTGCCGGCTTAAATCCAAGAGCTTTCAGACAATTCCGTTCAAATGGAAAGGCCCATCGGCCTGGCCCTGACAGTATAGTTGACTGTGAGCTGCTATGCCATTATGAAATGCTTCCATTGGAGGAACAGCTTGAAATTGCTAACCAAGTTGGAACAACACGATCGCAAATTCTCTCAAATCTAATAGATCTATCTCTCGGAACTAGCTTCTTGTGA 4368 0.4261 MSFAAYKMMHWPTGIENCASGFITHSRADFVPRIPAIQTDELDAEWPARREVGPIPNLIVTAANVLEVYIVRVQEEGSRESKGHVESKRGGLMDGLTGASLELACHYRLHGNVETMAVLSIGGSDASKRRDSIIITFKDAKISVLEYDDSIHGLRISSLHCFEGPEWLHLKRGREQFARGPLVKVDPQGRCGGVLVYDLQMIILKATQAGSGLVGEDDALGSGGAVAARIESSYMMNLRDLDMRHVKDFTFVHGYIEPVMVILHERELTWAGRLSWKHHTCMISALSISTTLKQHPLIWSAVNLPHDAYKLLAVPSPIGGVLVFGANTIHYHSQSASCALALNSYAVSPDSSQEMPRSSFNVELDAAYATWLLSDVALLSTKTGELLLLTLVYDGRVVQRLDLSKSKASVLSSGITTLGNSLFFLASRLGDSTLVQFSSGSGISMPSSNLKEEVGDIEGDAPSAKRLRRSSSDALQDMVSGEELSLYGSTPNRTESAQKTFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKNTRSHNADSSKLADDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTIAAGNLFGRRRVIQVYERGARILDGSFMTQDVSFAASNSETSSGSESAIVLSVSIADPYVLLRMSDGSIRILIGDPTTCTVSVTTPSFENSKRSVSACTLYHDKGPEPWLRKTSTDAWLSTGVGEAIDGTDGATQDHGDIYCVVCYENGALEIFDVPNFSCVFSVEKFMSGKSHLVDSLMKEASKDSQKVDKGSDEVTNQGRKENVQNMKVVELAMQRWSGKYSRPFLFGILSDGTILCYHGYLYESPDGTSKVEDLASAQGPVGLNSNSASRLRNLRFVRLPVDVYAREETSSGSPCQRITIFKNIGGYQGFFLSGSRPAWVMVFRERLRVHPQLCDGSIVAFTVLHNVNCNHGLIYVTSQGALKICQLPSGSSYDNYWPVQKIPLKATPHQVTYFAEKNLYPLIVSVPVPKPLNQVISSLGDQEVNHQTESQNLTSDEQNRFYTIDEFEVRIMEPEKSGGPWQTKATIPMQSSENALTVRMVTLLNTDTKENETLLAIGTAYVQGEDVAARGRVLLYSLGKSTDNSQTLVSEVYSKELKGAISALASLQGHILIASGPKIILHKWTGIELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDQKNIQIFYYAPKMSESWKGQKLLSRAEFHVGTHVTKFLRLQMLSTSSDRTGSGPGSDKTNRFALLFGTLDGSVGCVAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAFRQFRSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIANQVGTTRSQILSNLIDLSLGTSFL 1455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1682 1455 Pfam CPSF A subunit region 1087 1420 IPR004871 GO:0003676|GO:0005634
Glsi01g1682 1455 Pfam Mono-functional DNA-alkylating methyl methanesulfonate N-term 131 702 IPR018846 -
Glsi01g1682 1455 Gene3D - 975 1362 IPR015943 GO:0005515
Glsi01g1682 1455 Gene3D - 55 447 IPR015943 GO:0005515
Glsi01g1682 1455 FunFam cleavage and polyadenylation specificity factor subunit 1 975 1362 - -
Glsi01g1682 1455 PANTHER DNA REPAIR/RNA PROCESSING CPSF FAMILY 12 1440 - -
Glsi01g1682 1455 FunFam Cleavage and polyadenylation specificity factor subunit 1 53 446 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1682 Glsi-ChrGlsi01 77887923 77917050 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1682 01 77887923 77917050 Glsi01g1682 01 77887923 77917050 ECH