Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1679 ATGGTCATTTCGTTTTCTGCTCAGAAAGCTAACCTCGTCCGCCATGTCAAATTTTATGTCTCATGTTATGGAGGAATGGTGAAATTTGACCCATCTAATATGGTGTTAACATCTGGAGCAACTGCTACTATTGAGATGCTATCTTTCTGCTTGGCAGACCATGGAAGTGCTCTCCTTGTCCCTACACCTTATTATCCAGGGCAATTGATGGAAGCCTTTGGGGACATGCTTTACAGTCTTCTAGACTTCGCCCGGGAGAAAAATATCTATATCATTGCTGATGAAATATTTGCAGGCTCCATATATGGAAGGGAGAAGTTTGTGAGCCTAGCTGAAATTCTAAATTCAGAAGATCTAGACAAGAGCGGGGTTCATATAATATATGGCCTGCCAAAAGACCTCTCTCTTCCAGGCTTTAGAGTTGGGGTTATATACTCGTATAACAAGATTGTTTTGGCTGCTGCTAGGAAGTTAACTAGATTTTCCTCCATATCTGCTCCGACTCAGAGGTTAGTTATTTCAATGCTTTCAGATGAAAGATTTATTCCGGAGTACGAGAAGTGCATGACGAACTTGAGGCTCCTAGGAATCAAGTGTGCTAAGAGCAGTGCTGGTTTGTACTGTTGA 627 0.4195 MVISFSAQKANLVRHVKFYVSCYGGMVKFDPSNMVLTSGATATIEMLSFCLADHGSALLVPTPYYPGQLMEAFGDMLYSLLDFAREKNIYIIADEIFAGSIYGREKFVSLAEILNSEDLDKSGVHIIYGLPKDLSLPGFRVGVIYSYNKIVLAAARKLTRFSSISAPTQRLVISMLSDERFIPEYEKCMTNLRLLGIKCAKSSAGLYC 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1679 208 SUPERFAMILY PLP-dependent transferases 17 208 IPR015424 -
Glsi01g1679 208 Gene3D - 76 178 IPR015421 GO:0003824
Glsi01g1679 208 Gene3D - 16 67 IPR015421 GO:0003824
Glsi01g1679 208 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 12 67 - -
Glsi01g1679 208 Pfam Aminotransferase class I and II 25 66 IPR004839 GO:0009058|GO:0030170
Glsi01g1679 208 Pfam Aminotransferase class I and II 79 184 IPR004839 GO:0009058|GO:0030170
Glsi01g1679 208 Gene3D Aspartate Aminotransferase, domain 1 179 208 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1679 Glsi-ChrGlsi01 77863972 77867652 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1679 01 77863972 77867652 Glsi01g1679 01 77863972 77867652 ECH