Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1571 ATGTCTATGGTAGAGGTAAGAGTTCCAAATCTTGACTGCGAGGGATGTGCTTCCAAGTTAAAGAAAGCTCTCTTCAAGCTTAAAGGGGTGGATGAGGTGGAGGTTGAAATGGAGGCCCAGAAGATAACAGTGAGAGGGTATGGATTGGAGCTAGAGAAGAAGGTATTGAAGGCAATCAAACGCGCCGGTAAAACTGCAGAGCCATGGCCATTTCCAGGACATGCTCATTTTGCTTCGTTTTATAAGTACCCAGCTCACATTGTGAACCATTACTACGACTCTCACAAGAACGAAGCAGCCACCGGAGTCCACGCTTTCTTCCATACTCCTTCTCTTTATTCTGTTGCTGTGGCTTCTGATGAGGCCTTTGCTTCCCTCTTCAGTGATGATAACCCTCACGCTTGCACCATCATGTAA 417 0.4652 MSMVEVRVPNLDCEGCASKLKKALFKLKGVDEVEVEMEAQKITVRGYGLELEKKVLKAIKRAGKTAEPWPFPGHAHFASFYKYPAHIVNHYYDSHKNEAATGVHAFFHTPSLYSVAVASDEAFASLFSDDNPHACTIM 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1571 138 Gene3D - 2 66 - -
Glsi01g1571 138 SUPERFAMILY HMA, heavy metal-associated domain 2 70 IPR036163 GO:0046872
Glsi01g1571 138 ProSiteProfiles Heavy-metal-associated domain profile. 2 67 IPR006121 GO:0046872
Glsi01g1571 138 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 3 135 IPR045181 GO:0046872
Glsi01g1571 138 Pfam Heavy-metal-associated domain 6 64 IPR006121 GO:0046872
Glsi01g1571 138 CDD HMA 5 67 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1571 Glsi-ChrGlsi01 76670605 76672910 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1571 01 76670605 76672910 Glsi01g1571 01 76670605 76672910 ECH