Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1517 ATGGCGTCCCTCTTCACTGTGTTCTTGCTCTCGGTGTTTGCATGTTCCTCCGGGAGCTCTTTTGCGGAAAGCCAAAAGGAATTAAGGAATAAGGTGTTGAGCCAGGAAACTGCCTTACGATTGGATCACTCAATTTATCCCAACAGAATTGACCCATCACATGTTCTCCAACTCTCTTGGCAACCAAGGGTCTTTTTATATGAAGGTTTTCTGTCAGACAAGGAGTGTGACTACCTTATTTCTTTGGCACAAACTGTGAAAGAAAAGTCCTCAGGGAAAGATCACCGTTCCAAGGGAGATGTGGCAAACAGGATGCTTACCTCAGAAACTTCATTGAATATAGAAGATGATATTGTTGCAAGGATTGAAGAAAGAATTTCAGTCTGGACTTTCCTTCCTAAAGGGAACAGCAAACCTTTAGAGGTCATGCATTATGCGCTAGAAGAGGCTGGACAAAACTCAGATTTCTTTAACAAATCCAAATTGGAATCAAGTGGACCTTTAATGGCAACAGTTGTGCTATATCTCTCAAATGTCACCGAAGGGGGTCAAATTCTCTTCCCTGAGTCAGAGCCCAAGAGTAGAAGCTGGTCTGATTGTGGAAAAAGTAGTAATATTCTCAAACCAGTCAAAGGGAATGCATTTTTGTTCTTCTCTCTTCACCCAAGTGCATCTCCTGACACAAGTAGCTTCCATGCTAGATGCCCTGTCCTTAAGGGTGAAATGTGGGCTGCAACTAAATTCTTCTATGCAAAACCAGTTAGTGGGGAAAAGGTTTCATCCACATCAGATGATGGTGGTGAATGTATTGATGAGGATGATAACTGTCCCTCGTGGGCAGCCATGGGAGAATGTCAAAGAAATCCTGTATACATGATTGGCTCTCCTGATTATTATGGTACATGCAGGAAAAGTTGTAATGCATGCTGA 930 0.4258 MASLFTVFLLSVFACSSGSSFAESQKELRNKVLSQETALRLDHSIYPNRIDPSHVLQLSWQPRVFLYEGFLSDKECDYLISLAQTVKEKSSGKDHRSKGDVANRMLTSETSLNIEDDIVARIEERISVWTFLPKGNSKPLEVMHYALEEAGQNSDFFNKSKLESSGPLMATVVLYLSNVTEGGQILFPESEPKSRSWSDCGKSSNILKPVKGNAFLFFSLHPSASPDTSSFHARCPVLKGEMWAATKFFYAKPVSGEKVSSTSDDGGECIDEDDNCPSWAAMGECQRNPVYMIGSPDYYGTCRKSCNAC 309
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1517 309 SMART ShkT_1 268 309 IPR003582 -
Glsi01g1517 309 FunFam Probable prolyl 4-hydroxylase 12 54 250 - -
Glsi01g1517 309 ProSiteProfiles ShKT domain profile. 269 309 IPR003582 -
Glsi01g1517 309 Pfam 2OG-Fe(II) oxygenase superfamily 154 250 IPR044862 -
Glsi01g1517 309 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 34 248 IPR045054 -
Glsi01g1517 309 SMART p4hc 62 250 IPR006620 GO:0005506|GO:0016705|GO:0031418
Glsi01g1517 309 Gene3D q2cbj1_9rhob like domain 54 250 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi01g1517 Glsi-ChrGlsi01 75434080 75440169 Transposed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1517 01 75434080 75440169 Glsi01g1517 01 75434080 75440169 ECH