Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g1418 ATGGCTCAGGTGGTGGCCACGCGATCCATTCGGAGCTCCTTCTTGTGCCCCAGCTCTGGATCTGCACAAGACGGAGCCGAAAGGTTATTAAAACCTTCAACTTTAGCTTCCAAAGTGTTCGCACCTGAAGTGAAGAAGAGCTCCAAAGTTGGTTTTAGAAGAAGCTGCCAGATCACTGCAAGGAAATCGGCAGCTGCCCCCGTTGACATCGTTTCCGTTCAACCCGAGGACGATTTAATAATTGAGCCGCATTTGCTGAATATGCGTGGAATTCGGCAACTCGGTGACACATCAGTTGGCATGTGGTCGAAGCCCACATTTAGACGTAAGACAAAGATAGTTTGTACGATTGGTCCTTCTACCAACACCAGGGAAATGATTTGGAAGTTGGCTGAGGCTGGGATGAACGTTGCCCGCCTCAATATGTCTCATGGAGACCATGCTTCTCATCAGAAAGTTATTGACTTGGTTAAAGAATATAATGCACAATCAAAGGACAATGTAATCTCCATTATGCTTGACACAAAGGGTCCTGAGGTTAGGAGTGGGGATTTGCCACAACCGATCACATTAACAAGTGGGCAGGAATTCACTTTCACGATTCAGAGGGGTGTTGGAACTGCAGATTGTGTTAGTGTGAACTACGATGATTTTGTCAATGATGTGGAAGTAGGGGACATGCTTCTTGTAGATGGTGGCATGATGTCTTTTTCGGTTAAATCAAAGACAGAGGATTCAGTGAAATGTGAAGTTGTTGATGGTGGAGAACTCAAATCAAGGCGGCATTTAAATGTTCGAGGAAAAAGTGCCACACTTCCTTCCATCACTGAGAAGGACTGGGATGACATCAAATTTGGAGTGGACAACCAAGTTGACTTCTATGCTGTTTCCTTTGTTAAGGATGCTCAAGTGGTTCATGAACTCAAGAATTATTTAAAAAGCTGTGGTGCGGATATACATGTGATCGTGAAGATTGAAAGTGCAGACTCTATACCAAACCTGCATTCAATTATCACAGCGTCTGATGGGGCAATGGTTGCAAGAGGAGATCTTGGTGCAGAGCTCCCTATTGAGGAGGTTCCACTTTTGCAGGAAGAGATTATCAGGATTTGTCGTAGCATGGGGAAGGCTGTTATTGTAGCAACTAATATGCTGGAAAGCATGATTGTTCACCCAACGCCAACCAGAGCAGAGGTATCAGATATTGCAATTGCAGTTCGAGAAGGTGCTGATGGAATCATGCTTTCTGGAGAAACTGCTCATGGAAAGTTCCCACTTAAAGCTGTGAAAGTAATGCACACAGTAGCACTACGGACAGAAGCAACCATTCCAGGTGGTCAAATGCCTCCTAATCTTGGTCAAGTATTCAAGAACCACATGAGCGAGATGTTTGCATACCATGCGACAATGATGTCTAACACCCTTGGAACCTCGACTGTGGTCTTCACTAGATCAGGTTTCATGGCTATCCTTCTGAGCCACTATCGACCTTCAGGCACCATATTTGCTTTTACCGATGCGAAGAGGATACAACAGAGACTGGCTTTGTATCAAGGGGTTTGTCCTATATACATGGAATTCTCTGATGATGCTGAAGAGACTTTCACAAAGGCCTTGGATTTGCTGCAGAAGCAAGGAATGGTGAAGGAAGGAGAAGAAGTAGCACTTGTACAGAGTGGCAGACAACCCATATGGAGGTTCCAATCCACTCACAACATCCAGGTTCGGAAAGTGTAA 1737 0.4496 MAQVVATRSIRSSFLCPSSGSAQDGAERLLKPSTLASKVFAPEVKKSSKVGFRRSCQITARKSAAAPVDIVSVQPEDDLIIEPHLLNMRGIRQLGDTSVGMWSKPTFRRKTKIVCTIGPSTNTREMIWKLAEAGMNVARLNMSHGDHASHQKVIDLVKEYNAQSKDNVISIMLDTKGPEVRSGDLPQPITLTSGQEFTFTIQRGVGTADCVSVNYDDFVNDVEVGDMLLVDGGMMSFSVKSKTEDSVKCEVVDGGELKSRRHLNVRGKSATLPSITEKDWDDIKFGVDNQVDFYAVSFVKDAQVVHELKNYLKSCGADIHVIVKIESADSIPNLHSIITASDGAMVARGDLGAELPIEEVPLLQEEIIRICRSMGKAVIVATNMLESMIVHPTPTRAEVSDIAIAVREGADGIMLSGETAHGKFPLKAVKVMHTVALRTEATIPGGQMPPNLGQVFKNHMSEMFAYHATMMSNTLGTSTVVFTRSGFMAILLSHYRPSGTIFAFTDAKRIQQRLALYQGVCPIYMEFSDDAEETFTKALDLLQKQGMVKEGEEVALVQSGRQPIWRFQSTHNIQVRKV 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g1418 578 ProSitePatterns Pyruvate kinase active site signature. 319 331 IPR018209 GO:0004743|GO:0006096
Glsi01g1418 578 PANTHER PYRUVATE KINASE 97 556 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi01g1418 578 SUPERFAMILY PK beta-barrel domain-like 178 269 IPR011037 -
Glsi01g1418 578 SUPERFAMILY PK C-terminal domain-like 427 578 IPR036918 -
Glsi01g1418 578 Gene3D - 111 436 IPR040442 -
Glsi01g1418 578 Gene3D - 451 578 IPR036918 -
Glsi01g1418 578 NCBIfam pyruvate kinase 109 577 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi01g1418 578 Gene3D - 179 272 IPR015806 GO:0004743|GO:0006096
Glsi01g1418 578 PRINTS Pyruvate kinase family signature 167 183 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi01g1418 578 PRINTS Pyruvate kinase family signature 291 305 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi01g1418 578 PRINTS Pyruvate kinase family signature 348 372 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi01g1418 578 PRINTS Pyruvate kinase family signature 373 397 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi01g1418 578 PRINTS Pyruvate kinase family signature 321 347 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi01g1418 578 PRINTS Pyruvate kinase family signature 398 416 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi01g1418 578 PRINTS Pyruvate kinase family signature 417 433 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Glsi01g1418 578 FunFam Pyruvate kinase 274 439 - -
Glsi01g1418 578 FunFam Pyruvate kinase 440 559 - -
Glsi01g1418 578 FunFam Pyruvate kinase 179 272 - -
Glsi01g1418 578 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 99 443 IPR015813 GO:0003824
Glsi01g1418 578 Pfam Pyruvate kinase, alpha/beta domain 466 558 IPR015795 -
Glsi01g1418 578 Pfam Pyruvate kinase, barrel domain 109 444 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g1418 Glsi-ChrGlsi01 72462830 72469902 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g1418 01 72462830 72469902 Glsi01g1418 01 72462830 72469902 ECH