Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0240 ATGGCTCAGCCGCTCGTGAAGAAGGACGATGACCGGGACGATGAAGCCGAGTACTCTCCCTTTTTGGGAATTGAAAAGGGGGCTGTTCTTCAGGAAGCCAGGGTTTTTAATGACCCACAACTAGATGCTAGGAGATGTTCACAGGTTATCACAAAACTTTTATACCTACTGAATCAAGGAGACACATTTACCAAGGTCGAAGCCACAGAAGTTTTCTTTTCTGTGACTAAGCTTTTTCAGTCTAAAGATATTGGGTTAAGGAGAATGGTCTACCTGATTATAAAGGAGCTCTCTCCCTCTGCAGATGAGGTTATTATTGTGACAAGCTCTCTCATGAAGGACATGACTAGCAAGACCGATATGTATAGGGCAAATGCCATTCGTGTGCTTTGTCGTATTACAGATGGAACCCTCCTTACCCAGATTGAGCGGTATTTGAAACAAGCAATTGTAGATAAAAATCCTGTTGTTGCAAGTGCAGCCCTAGTTAGTGGCATTCATCTACTCCAGACAAATCCTGAGATTGTAAAAAGGTGGAGCAATGAGGTTCAGGAAGCAGTTCAATCAAGAGCAGCTCTTGTGCAGTTTCATGCACTAGCTTTGCTACATCAGATACGGCAGAATGATCGGCTAGCTGTTAGCAAGTTGGTTACCAGCTTGACAAGAGGAACTGTTCGCTCCCCTTTGGCCCAATGCCTTCTGATCCGTTATACAAGTCAGGTTATTTGTGAGTCAGGCAATAATACACAAACAGGGGACCGCCCATTTTATGATTATCTTGAGAGTTGCCTTCGTCACAAGTCAGAGATGGTGATTTTTGAAGCTGCCAGAGCAATTACAGAGCTCAATGGTGTAACAAGCCGAGAATTAACACCAGCAATTACTGTTCTTCAGCTCTTCTTAAGTTCTTCTAAGCCAGTTTTGAGGTTTGCCGCTGTTCGCACATTGAACAAGGTGGCAATGACACATCCAATGGCTGTCACTAACTGCAATATTGATATGGAGAGTTTAATCTCTGACCAGAACAGAAGCATTGCCACACTTGCAATAACTACGCTTTTGAAGACAGGAAATGAGTCAAGTGTGGATCGTCTTATGAAGCAGATTACAAATTTCATGTCAGATATTGCAGATGAATTCAAAATTGTTGTTGTTGATGCAATAAGATCATTGTGTTTAAAGTTTCCCTTGAAATACCGATCTCTGATGAACTTCCTGAGTAATATTCTCAGGGAAGAAGGTGGGTTTGAGTACAAGAAGGCAATTGTAGATTCAATTGTGATTCTCATAAGAGATATCCCAGAAGCAAAGGAGAGCGGGTTGCTTCATCTTTGTGAGTTCATTGAAGATTGTGAATTCACTTATTTGTCCACACAGATATTGCACTTCCTGAGTATTGAAGGGCCAAAAACATCAGACCCCAGCAAATATATACGTTACATATATAATAGAGTACATCTTGAGAATGCAACAGTAAGGGCCAGTGCTGTGAGCACTTTGGCAAAGTTTGGAGCTGCCATTGATGAGTTAAAGCCCCGGATATTTGTTCTGCTAAGGCGATGTCTTTTTGACAGTGATGATGAGGTCCGTGATAGGGCAACACTTTATCTGAATACACTTGGAGGTGATGGTACAGTTGTTGAGACGGATAAAGATGTTAAAGACTTCCTCTTTGGGGAATTTGATATCCCACTTGTCAATCTGGAGACTAGTTTGAAAAATTACGAGCCTTCAGAGGAGCCTTTTGACATCAACTCTGTGCCCAAGGAAGTTAAGTCTCAGCCACTTGCAGAGAAGAAAGCACCGGGTAAAAAGCCAATCGGTTTGGGTGCTCCTCCAAGTGGTCCTCCATCAACTGCAGATGCATACGAAAAGCTGCTTTCCTCCATTCCTGAGTTTGCAAACTTTGGGAAGCTTTTTAAGTCCTCAGCACCTGTGGAGCTTACTGAAGCAGAGACAGAATATGCAGTTAATGTTGTCAAACACATTTTTGATAGGCATGTTGTGTTCCAGTACAACTGCACAAACACAATACCAGAGCAATTACTGGAAGATGTTACTGTAATTGTAGATGCTTCAGAAGCTGAGGAATTTTCTGAAGTTTTCTGCAAGCCTCTCAGGTCTCTTCCTTATGATTCACCTGGACAGACATTTGTGGCTTTTGAGAAGCCGGAGGGATTACAAGCAGTTGGAAAATTTTCCAACATTCTGAAATTTATCGTTAAAGAGGTTGATCCATCAACTGGTGAGGCAGAAGATGATGGTGTTGAAGATGAATACCAGCTGGAGGATCTGGAGGTTGTTGCAGCTGACTACATATTGAAAGTAGGGGTGTCTAATTTTAGGAATGCATGGGAAACCATGGATTCTGATTTTGAGCGAGTGGATGAATATGGTCTTGGCCCAAGGGAGAACTTGGCTGAAGCTGTAAATGCTGTCATCGATCTTCTGGGCTTGCAACCCTGTGAGGGCACAGAGGTTGTCCCACCCAATTCAAGGTCACACACATGTTTATTGTCCGGGGTATTCATAGGAAATGTGAAGGTGCTTGTGCGCTTGTCTTTTGGACTTGATGGTAAGGATGTTGCGATGAAACTGGCTGTTAGATCTGAGGATGAATCTGTCAGCGATGCCATTCATGAGATTGTGGCAAGCGGCTAG 2661 0.4288 MAQPLVKKDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQGDTFTKVEATEVFFSVTKLFQSKDIGLRRMVYLIIKELSPSADEVIIVTSSLMKDMTSKTDMYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTSQVICESGNNTQTGDRPFYDYLESCLRHKSEMVIFEAARAITELNGVTSRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVDAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIRDIPEAKESGLLHLCEFIEDCEFTYLSTQILHFLSIEGPKTSDPSKYIRYIYNRVHLENATVRASAVSTLAKFGAAIDELKPRIFVLLRRCLFDSDDEVRDRATLYLNTLGGDGTVVETDKDVKDFLFGEFDIPLVNLETSLKNYEPSEEPFDINSVPKEVKSQPLAEKKAPGKKPIGLGAPPSGPPSTADAYEKLLSSIPEFANFGKLFKSSAPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLEDVTVIVDASEAEEFSEVFCKPLRSLPYDSPGQTFVAFEKPEGLQAVGKFSNILKFIVKEVDPSTGEAEDDGVEDEYQLEDLEVVAADYILKVGVSNFRNAWETMDSDFERVDEYGLGPRENLAEAVNAVIDLLGLQPCEGTEVVPPNSRSHTCLLSGVFIGNVKVLVRLSFGLDGKDVAMKLAVRSEDESVSDAIHEIVASG 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0240 886 FunFam Coatomer subunit gamma 333 541 - -
Glsi01g0240 886 Gene3D - 769 884 IPR012295 -
Glsi01g0240 886 Gene3D Coatomer, gamma subunit, appendage domain 617 768 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Glsi01g0240 886 PIRSF Gamma-COP 7 884 IPR017106 -
Glsi01g0240 886 FunFam Coatomer subunit gamma 615 768 - -
Glsi01g0240 886 FunFam Coatomer subunit gamma 23 316 - -
Glsi01g0240 886 MobiDBLite consensus disorder prediction 578 618 - -
Glsi01g0240 886 FunFam Coatomer subunit gamma 769 884 - -
Glsi01g0240 886 SUPERFAMILY ARM repeat 29 581 IPR016024 -
Glsi01g0240 886 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 770 883 IPR032154 -
Glsi01g0240 886 PANTHER COATOMER SUBUNIT GAMMA 1 884 IPR017106 -
Glsi01g0240 886 Gene3D - 23 316 IPR011989 -
Glsi01g0240 886 Pfam Coatomer gamma subunit appendage platform subdomain 622 767 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Glsi01g0240 886 SUPERFAMILY Clathrin adaptor appendage domain 617 771 IPR013041 -
Glsi01g0240 886 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 772 883 IPR009028 GO:0006886|GO:0016192|GO:0030117
Glsi01g0240 886 Pfam Adaptin N terminal region 29 540 IPR002553 GO:0006886|GO:0016192|GO:0030117
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0240 Glsi-ChrGlsi01 1913291 1920980 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g0240 01 1913291 1920980 Glsi01g0240 01 1913291 1920980 ECH