Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0220 ATGGAGGGAATTGGAGGTGGCAGTGCCACGGCTCCTGCACATGTGAACCAAGGGTGGCAGAACTTTATGAGGCTCTTTCAATATTATCTTGATAGAACTACTCCTCATACTACATATAGATGGATTGGGACTTCGGTTTTGGCATTAATCTATGTTTTGAGGGTTTATTATGTCCAAGGATTTTACATTGTGTCTTACGGACTGGGAATCTATCTGCTGAATCTGTTGATTGGGTTTCTGTCCCCTTTGGTTGATCCCGAGCTGGAACCTTCTGATGGACCTTTGCTGCCAACAAAAGGTTCTGATGAGTTCAAACCATTCATTCGCCGGCTTCCTGAGTTCAAATTCTGGTATTCTTTCACAAAGGCTTTCTGCATAGCCTTTGTCATGACCTTCTTTTCCTTATTTGATGTTCCTGTCTTTTGGCCTATATTACTCTGTTACTGGATTGTTCTGTTTATCCTTACAATGAGGCGCCAAATTGCTCACATGGTTAAATACAGATATGTGCCATTCAACTTAGGAAAGCAGAAGTATGGTGGTAAGAAATCTTCTGCAAGTGGCAGTGGCTCTCGTGCAGATTGA 585 0.4239 MEGIGGGSATAPAHVNQGWQNFMRLFQYYLDRTTPHTTYRWIGTSVLALIYVLRVYYVQGFYIVSYGLGIYLLNLLIGFLSPLVDPELEPSDGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSLFDVPVFWPILLCYWIVLFILTMRRQIAHMVKYRYVPFNLGKQKYGGKKSSASGSGSRAD 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0220 194 PIRSF AtER_Rer1p 3 190 IPR004932 GO:0016020
Glsi01g0220 194 PANTHER PROTEIN RER1 10 185 IPR004932 GO:0016020
Glsi01g0220 194 Pfam Rer1 family 20 180 IPR004932 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0220 Glsi-ChrGlsi01 1744185 1746349 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0220 1 194 Miscellaneous Gene Families AT2G21600 75.385 1.03e-108 307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g0220 01 1744185 1746349 Glsi01g0220 01 1744185 1746349 ECH