Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0136 ATGTCACCAGCGACCGCAAAGTCCAGCAGAATCCGTCACATTGTCCGAATCCGGCAAATGCTCCTCCGGTGGCGTAAGAAGGCCCGTATAACGGCTGTTAAATCGCCGTCCGATGTCCCCGCCGGCCACATAGCCGTCTGCGTGGGCCCGAGCTGCAGAAGGTTTATCGTGAGGGCGACGTACCTGAACCACCCCATCTTCAAGAAGCTTCTGTCACAAGCCGAAGAAGAGTACGGATTCTGCAACCAAGGTCCCTTGGCGATCCCGTGCGACGAGTCGCTGTTCGAAGAGGTGCTGCGAGTTGTGTCTCGGACAGAGTCGGGTCACTCGGCCCGGTTCTTGAGCCTCGAAGATTTCCAGAGGCGATGTCACGTGGATGTCCGAAGTAGTTTCGACTTTGTAGGAGAATCCAGGCCCTTGCTTCATGACGAACCGATCTGTTAA 444 0.5631 MSPATAKSSRIRHIVRIRQMLLRWRKKARITAVKSPSDVPAGHIAVCVGPSCRRFIVRATYLNHPIFKKLLSQAEEEYGFCNQGPLAIPCDESLFEEVLRVVSRTESGHSARFLSLEDFQRRCHVDVRSSFDFVGESRPLLHDEPIC 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0136 147 Pfam Auxin responsive protein 16 101 IPR003676 GO:0009733
Glsi01g0136 147 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 26 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0136 Glsi-ChrGlsi01 1114078 1114521 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0136 6 141 Calmodulin-binding Proteins AT4G34750 52.448 5.10e-45 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g0136 01 1114078 1114521 Glsi01g0136 01 1114078 1114521 ECH