Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0135 ATGGCCATTAGAAAATCAAGCAAGCTTTCCCAAACGGCAGTTCTCAAACAAATCCTCAAGAGATGTTCAAGCTTAGGAAAGAAACATGGCTATGACGATGATGGTCTCCCTCTTGACGTCCCAAAAGGCCATTTTGCTGTTTACGTTGGTGAAAACAGAAGTAGGTACATCGTCCCTATCTCGTTCTTGACTCACCCAGAATTCCAATCCCTCCTCCGTCAAGCTGAAGAAGAATTTGGCTTCGACCACGATATGGGTCTCACTATTCCTTGTGAAGAAGTTGTTTTCCGGTCTCTAACAACAATGCTTAGATGA 315 0.4381 MAIRKSSKLSQTAVLKQILKRCSSLGKKHGYDDDGLPLDVPKGHFAVYVGENRSRYIVPISFLTHPEFQSLLRQAEEEFGFDHDMGLTIPCEEVVFRSLTTMLR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0135 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 38 102 IPR003676 GO:0009733
Glsi01g0135 104 Pfam Auxin responsive protein 27 103 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0135 Glsi-ChrGlsi01 1103506 1103820 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0135 37 99 Calmodulin-binding Proteins AT3G43120 57.143 4.95e-21 80.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g0135 01 1103506 1103820 Glsi01g0135 01 1103506 1103820 ECH