Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi01g0095 ATGGATCCCTTCTCCTGGTGCTGTTTCACCGTCATCCTTACCTCTGCTTTGCTAGTCATTCCCGGAGGTGTTCTTGGTACCACATTTACATTTGTAAACAGATGCGACTCCACCGTCTGGCCGGGTATTCTTGCAAATGCGGGTAGCCCGAACCTCGACAGCACCGGATTCGAGCTCCCCAAAGAAACTTCCCGCTCATTTCTAGCTCCGACTGGATGGTCCGGCCGATTCTGGGGTCGAACCGGTTGCAAATTCGACGGATCCGACTCAGGGTCCTGTATCACCGGCGACTGCGGCTCTGGTCAGCTCGAATGCAACGGTGCCGGAGCAGCGCCGCCGGTTACTCTTGCTGAGTTCACGCTCGGCACAGGTGGGCAAGATTTCTACGACGTCAGTCTCGTAGATGGGTATAACGTTCCGATGATCGTGGAAGGGACAGGCGGGTCGGGTCTTTGCGCTTCAACCGGGTGCACGTCGGATCTGAACAAGCAATGCCCAGCGGAGCTGAAAGCGGGGGACGGAGGCGCGTGCAAGAGCGCGTGCGAGGCATTTAACAGCCCGGAGTACTGTTGCAGCGGCGCGTATAATTCGCCGGCGACGTGTAGGCCGTCGGTATACTCTGAAATCTTCAAGACGGCTTGCCCGAGATCGTATAGCTACGCATACGATGATGCTACGAGTACATTTACTTGTACGGGTGCTGATTATACGGTGACCTTTTGTCCATCCTCTCCAAGTCAGAAATCTTCACAAGATTCGACCCCCATGACCTCAACACCCACCGAGGTCTCCGGATCCGGAGGCACGGGGGTAGATACGGGTACGGAGTCAGGTATGGGGTATTCGTTTAGTGGTTCAGGGTCAAGTACAGGATCCGGAGGAGAGGCAATGCTAGCAGATGGGTCATATCTAGCGGGTTTGGCCATGGGACACTCGCCCACTATGCTCTCCTTCTCTGCTCTACAACCTGCACTCGTCTTGGCTGCTAGCTTTTTACTTGTTCTCTCCAAGCTTTAG 1017 0.5526 MDPFSWCCFTVILTSALLVIPGGVLGTTFTFVNRCDSTVWPGILANAGSPNLDSTGFELPKETSRSFLAPTGWSGRFWGRTGCKFDGSDSGSCITGDCGSGQLECNGAGAAPPVTLAEFTLGTGGQDFYDVSLVDGYNVPMIVEGTGGSGLCASTGCTSDLNKQCPAELKAGDGGACKSACEAFNSPEYCCSGAYNSPATCRPSVYSEIFKTACPRSYSYAYDDATSTFTCTGADYTVTFCPSSPSQKSSQDSTPMTSTPTEVSGSGGTGVDTGTESGMGYSFSGSGSSTGSGGEAMLADGSYLAGLAMGHSPTMLSFSALQPALVLAASFLLVLSKL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi01g0095 338 SUPERFAMILY Osmotin, thaumatin-like protein 27 243 IPR037176 -
Glsi01g0095 338 PRINTS Pathogenesis-related protein signature 28 40 IPR001938 -
Glsi01g0095 338 PRINTS Pathogenesis-related protein signature 89 118 IPR001938 -
Glsi01g0095 338 PRINTS Pathogenesis-related protein signature 232 241 IPR001938 -
Glsi01g0095 338 PRINTS Pathogenesis-related protein signature 127 143 IPR001938 -
Glsi01g0095 338 PRINTS Pathogenesis-related protein signature 76 87 IPR001938 -
Glsi01g0095 338 SMART tha2 29 242 IPR001938 -
Glsi01g0095 338 ProSiteProfiles Thaumatin family profile. 26 242 IPR001938 -
Glsi01g0095 338 Pfam Thaumatin family 33 242 IPR001938 -
Glsi01g0095 338 MobiDBLite consensus disorder prediction 245 271 - -
Glsi01g0095 338 CDD TLP-PA 28 241 - -
Glsi01g0095 338 Gene3D Thaumatin 27 242 IPR037176 -
Glsi01g0095 338 PANTHER OS03G0233200 PROTEIN 13 242 IPR001938 -
Glsi01g0095 338 FunFam THAUMATIN-LIKE PROTEIN 1 27 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi01g0095 Glsi-ChrGlsi01 811158 813073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi01g0095 12 251 Receptor kinase-like Gene Family AT5G38280 47.431 2.13e-72 235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi01g0095 01 811158 813073 Glsi01g0095 01 811158 813073 ECH