LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Eupl01g00765	ATGGCAGCGATTCGGCTGCTGTTCTTCCTGGTGGTGTGCTCTGCGGGACTTCACGTCATCTCTGCCGTTACAGACAGCCAAGATGTTGCGGCGCTCAAATCGCTGAACGATATGTGGCAGAACACGCCACCGAGCTGGGGAAGATCGAATGATCCTTGCGAACATTGGGAAGGAGTCAACTGTACTGATTCCAGGGTGACAGAATTGAGATTATCTACCATGGGTCTCAAAGGTAGACTAGAAGGTGACATTGGGGGACTCACTGAATTGAGATCATTGGACCTGTCCTTTAACCGCGATCTTAGAGGCTCCCCTACTTCACAACTAGGGGCTCTGCAAAAGCTAAACATTCTGATCCTAGCTGGCTGCAGCTTCTCTGGCAACATCCCAAGTGAAATAGGCAATCTACCAGAGCTGTCTTACTTGGCTCTGAATTCAAACAACTTCACTGGTAAAATACCTCCTTCATTGGGTAAACTTTCCAAACTTTACTGGCTGGACCTGGCAGACAATCAGCTGGAAGGATCTCTCCCTGTCTCAACCGGCACCACCCCAGGCTTGGACTTGCTCCTACGGGCAAAGCACTTTCATTTTAACAAGAACCAGCTATCAGGTTCCATCCCGCCCAAGCTTTTCAGCTCTGAGATGGAGCTGATACACATACTATTCGACGGAAATCAGTTAAGTGGGACAATCCCTCCCACATTGGGACTCGTTAATACTCTTGAGGTTCTTCGGCTTGATAGGAATTCTCTAGAAGGACCAATTCCCTCCAGCCTTAGCAATCTCACAAATGTCAGAGAACTGCATTTAGCACACAATCAGCTGACGGGTTCAGTACCTGATCTATCTAAAATGAGCTCCATCAATTACGTGGACATGAGCAACAATTCATTCGACCCATCAGAAGCTCCAAACTGGTTCTTGACAGCACAATCTCTCACCACTCTGGTGATGGAATTTGGAAAACTTCAGGGGCGTGTGCCAAAAAATCTCTTCAGCTCTCCACAGCTACAGCAAGTGAAGCTGAAGAACAATCAATTCAATGACACTCTAGACATGAGTGACGGTGTAAGCGAGCAACTACAGCTTGTTGATTTGCAAAACAACAAAATTTCTTCCGTAGGCCAGTTATACGAAAATACTCTAATACTAATCGGAAACCCAGTGTGCGCTTCTGGTCCTCTTTCAAATACTAAGTCCTGCCAGGTTCCAGAAGACAATCGACAAACCTACTCCACCAGCGCTAATTGCGACTCCAAATCGTGTCCCCTAGGTCAGAAACTCAGCCCTGTTTGCAACTGCGCCTATCCATATGAAGGGACATTGTATTTCAGAGCACCCTACTTCCGGGACTTGTCCAACGACACTGTATTCCATTTACTGGAAATGAGCCTGTGGAAGAATCTCAGCCTATCTCCCGGTTCAGTTTCCCTTCAGAATCCCTTCTTCAATAAGGATGACTATCTTCAGGTTCAGTTGGATCTCTTTCCATCCACGGGGAAGTATTTTAATAGATCAGAGATTCAGAGGATTGGATTTGATCTGAGTAATCAAAATTACAAGCCTCCTCATGAGTTTGGACCATACTATTTCATTGCATTTCCTTATGCTTTCCAAGATGAACATGGAGGAACTTCGATGAGTTTGGGTGTGATTATTGGAATAGCAATTGGCAGTGCTGTTCTGATCCTCTTACTTGTGGGGGTGGGGATCTACGCCGTCCGGCAAAAGAAGCGTGCAGAAAGAGCACTTGAATTAAGTAAACCATTCGCATCTTGGGCTCCGAGCGGTAAAGATAGTGGCGGTGCACCGCAATTGAAAGGAGCCAGATGGTTTTCTTACGATGAACTCAAAAAGTCCACCAACAATTTCTTAGACAGCAATGAAATTGGATCTGGGGGCTATGGGAAGGTTTATAGAGGGATGCTCTCAAGTGGGCAACTGGTGGCAATCAAAAGAGCACAGATAGGATCTATGCAAGGTGGGCTTGAGTTCAAGACTGAAATTGAGTTGCTTTCACGGGTTCATCACAAGAACCTTGTCGGGCTCGTGGGTTTTTGTTTTGAGCAAGGAGAACAGATGTTGGTCTATGAATTTATGCCTAATGGGACACTGAGGGAAAGCTTGGCCGGGAGATCTGGTATTCACCTGGATTGGAAGAGGAGACTTCGCATTGCTCTAGGTTCGGCCAGAGGATTAACATATCTTCACGAGCTTGCTAATCCCCCCATAATTCACAGAGATGTCAAGTCTACCAATATTCTATTGGATGAAAATTTAACTGCAAAGGTTGCAGATTTTGGCCTATCGAAGCTGGTATCAGATAGTGCAAAAGGGCATGTTTCGACTCAAGTTAAAGGCACATTGGGTTATCTGGACCCTGAGTATTACATGACTCAACAATTGACAGAGAAGAGCGATGTTTACAGCTTCGGTGTGGTAATGCTTGAACTAGTAACTGCTAAACAACCAATAGAGAAGGGAAAGTACATTGTTCGAGAGGTGCGAATGTTAATTAATAAGAACGACGAAGAGTACTATGGCCTAAAGGAGATAATCGATTCAACTATTCGAAATGTAACTAATCGCATAGGTTTTGGGAGGTTTGTGGAGTTGGCCATGCAATGTGTCGAAGAATCAGCCGCAGACCGTCCAACAATGAGTGATGTGGTGAAGGAGATTGAAACCATACTACAAAATGATGGGCTGAACACAAACTCAACCTCGGCATCCTCATCTGCTACAGAGTTTGGAACTGCAAAGGGTGCTCCTCGCCATCCTTATAATGATTCTCTGCCCAGAAAGGATGCAAATAACAGTGATTCCTTTGACTACAGTGGTGGGTATGCACTATCAGCCAAAGTTGAGCCCAAGTAG	2880	0.4545	MAAIRLLFFLVVCSAGLHVISAVTDSQDVAALKSLNDMWQNTPPSWGRSNDPCEHWEGVNCTDSRVTELRLSTMGLKGRLEGDIGGLTELRSLDLSFNRDLRGSPTSQLGALQKLNILILAGCSFSGNIPSEIGNLPELSYLALNSNNFTGKIPPSLGKLSKLYWLDLADNQLEGSLPVSTGTTPGLDLLLRAKHFHFNKNQLSGSIPPKLFSSEMELIHILFDGNQLSGTIPPTLGLVNTLEVLRLDRNSLEGPIPSSLSNLTNVRELHLAHNQLTGSVPDLSKMSSINYVDMSNNSFDPSEAPNWFLTAQSLTTLVMEFGKLQGRVPKNLFSSPQLQQVKLKNNQFNDTLDMSDGVSEQLQLVDLQNNKISSVGQLYENTLILIGNPVCASGPLSNTKSCQVPEDNRQTYSTSANCDSKSCPLGQKLSPVCNCAYPYEGTLYFRAPYFRDLSNDTVFHLLEMSLWKNLSLSPGSVSLQNPFFNKDDYLQVQLDLFPSTGKYFNRSEIQRIGFDLSNQNYKPPHEFGPYYFIAFPYAFQDEHGGTSMSLGVIIGIAIGSAVLILLLVGVGIYAVRQKKRAERALELSKPFASWAPSGKDSGGAPQLKGARWFSYDELKKSTNNFLDSNEIGSGGYGKVYRGMLSSGQLVAIKRAQIGSMQGGLEFKTEIELLSRVHHKNLVGLVGFCFEQGEQMLVYEFMPNGTLRESLAGRSGIHLDWKRRLRIALGSARGLTYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSAKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELVTAKQPIEKGKYIVREVRMLINKNDEEYYGLKEIIDSTIRNVTNRIGFGRFVELAMQCVEESAADRPTMSDVVKEIETILQNDGLNTNSTSASSSATEFGTAKGAPRHPYNDSLPRKDANNSDSFDYSGGYALSAKVEPK*	960

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Eupl01g00765	959	SUPERFAMILY	L domain-like	60	387	-	-
	Eupl01g00765	959	Gene3D	Phosphorylase Kinase; domain 1	599	700	-	-
	Eupl01g00765	959	CDD	STKc_IRAK	631	898	-	-
	Eupl01g00765	959	Pfam	Protein tyrosine and serine/threonine kinase	629	894	IPR001245	GO:0004672\|GO:0006468
	Eupl01g00765	959	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	745	757	IPR008271	GO:0004672\|GO:0006468
	Eupl01g00765	959	PANTHER	RECEPTOR-LIKE PROTEIN 55	33	898	-	-
	Eupl01g00765	959	FunFam	Predicted protein	185	400	-	-
	Eupl01g00765	959	SMART	serkin_6	625	878	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl01g00765	959	Gene3D	Transferase(Phosphotransferase) domain 1	701	919	-	-
	Eupl01g00765	959	FunFam	Leucine-rich repeat protein kinase family protein	593	700	-	-
	Eupl01g00765	959	Gene3D	Ribonuclease Inhibitor	24	184	IPR032675	-
	Eupl01g00765	959	FunFam	LRR receptor-like serine/threonine-protein kinase HSL2	701	911	-	-
	Eupl01g00765	959	ProSitePatterns	Protein kinases ATP-binding region signature.	631	653	IPR017441	GO:0005524
	Eupl01g00765	959	SUPERFAMILY	Protein kinase-like (PK-like)	610	906	IPR011009	-
	Eupl01g00765	959	MobiDBLite	consensus disorder prediction	903	959	-	-
	Eupl01g00765	959	Gene3D	Ribonuclease Inhibitor	185	387	IPR032675	-
	Eupl01g00765	959	ProSiteProfiles	Protein kinase domain profile.	625	899	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Eupl01g00765	959	FunFam	Leucine-rich repeat family protein	27	182	-	-
	Eupl01g00765	959	MobiDBLite	consensus disorder prediction	903	919	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Eupl01g00765	Eupl-Chr1	25607640	25618138	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Eupl01g00765	9	959	Receptor kinase-like Gene Family	AT1G79620	67.407	0.0	1326

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-VIII-1	Eupl01g00765		PK_Tyr_Ser-Thr	2.9e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Eupl01g00765	-		-	csin:114282805	1488.4