Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph8g1344 ATGGCTACTTGCACCACCACACATTCCTCCCTCATGCTCACTCCTCCCACTTCCTCTGTACACCCACAAGATCTCACTCCCTCGCTTTCTTCCTTCAACCCTAAGCCTTTCTCCTCAAATTTCTCTCTCTTCCCTTTGCGTTTAAAGTCTCCAGCTCGAATCTCCGGTAAATGGATCGATGTCATATCGCAGAAACAAGCTATTTCTAGGTCTAACCATGTCGTTGTGGCTGCTTTGGCTGCCCAGGCCGATGTCACTGAGACTGTGGATGGGAAGAATCAAGCGGACGGAGGTGAAGAAGGGTCGACCACTGATGCTATTACGAAGCCCAAGCCAAAGAAAGGGAAGGCCGCATTGTCTCTTAAGAGGGACAGGGTTATATTTACCGCTCAGGGATTTCAGTTTCAGAACTTACTGCCCCTTTATAAAGAAAATATGAGATCTAAGAGGTTATTAGAGATTCGGAGACTGAGGGAGAATATAAAGGAGTATGATTTAAAGACAGCAATATCTTTACTTAAACAAACAGCAAATACAAAGTTTGTAGAAACAGTAGAAGCCCATTTTCGCCTCAACATTGACCCTAAATATAATGATCAGCAATTAAGAGCAACAGTAAATTTACCCAAGGGAACTGGAAAGCCTGTCAAAGTTGTTGTTCTTACTCAAGGGGAAAAGTTTGATGAAGCAAAAGATGCGGGAGCAGATTTGGTAGGCGGAGAGGAACTGATAGAACAGATAAAAGGAGGATTCATGGAATTTGATAAATTGATTGCTTCTCCAGATATGATGCCTAAGGTAGCTAGTCTAGGAAAAATCCTGGGACCAAGAGGCCTGATGCCTAATCCTAATGCTGGGACTGTAATAGCCAACATTCCTCAGGCTATATCAGAATTCAAGAAGGGAAAGGTCGACTACAGGGCAGATAAAACTGGAATTGTGCATTTGCCTTTTGGAAAAGCCAACTTTTCTGAGGAGGACCTTCTTGTAAACTTAACTGCTGCCATAAAATCTGTAGAAGCAAATAAACCACCGGGTGCCAAAGGTGTGTACTGGAGAAGTGCACACATATGCTCAGCAATGGGACCTTCTATCAGATTAAACATCAAGGAAATGCTGGATTATAGACTTCCATCAGATATCTGA 1146 0.4311 MATCTTTHSSLMLTPPTSSVHPQDLTPSLSSFNPKPFSSNFSLFPLRLKSPARISGKWIDVISQKQAISRSNHVVVAALAAQADVTETVDGKNQADGGEEGSTTDAITKPKPKKGKAALSLKRDRVIFTAQGFQFQNLLPLYKENMRSKRLLEIRRLRENIKEYDLKTAISLLKQTANTKFVETVEAHFRLNIDPKYNDQQLRATVNLPKGTGKPVKVVVLTQGEKFDEAKDAGADLVGGEELIEQIKGGFMEFDKLIASPDMMPKVASLGKILGPRGLMPNPNAGTVIANIPQAISEFKKGKVDYRADKTGIVHLPFGKANFSEEDLLVNLTAAIKSVEANKPPGAKGVYWRSAHICSAMGPSIRLNIKEMLDYRLPSDI 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph8g1344 381 Hamap 50S ribosomal protein L1 [rplA]. 143 372 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
Enph8g1344 381 CDD Ribosomal_L1 166 367 IPR028364 -
Enph8g1344 381 MobiDBLite consensus disorder prediction 89 115 - -
Enph8g1344 381 SUPERFAMILY Ribosomal protein L1 161 369 IPR023674 -
Enph8g1344 381 Gene3D - 211 302 IPR016095 -
Enph8g1344 381 Gene3D - 164 367 - -
Enph8g1344 381 PANTHER 54S RIBOSOMAL PROTEIN L1, MITOCHONDRIAL 72 376 - -
Enph8g1344 381 FunFam 50S ribosomal protein L1 211 302 - -
Enph8g1344 381 ProSitePatterns Ribosomal protein L1 signature. 264 282 IPR023673 -
Enph8g1344 381 MobiDBLite consensus disorder prediction 1 25 - -
Enph8g1344 381 Pfam Ribosomal protein L1p/L10e family 173 363 IPR028364 -
Enph8g1344 381 NCBIfam 50S ribosomal protein L1 147 371 IPR005878 GO:0003723|GO:0003735|GO:0006412|GO:0015934
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph8g1344 Enph-Chr8 21890854 21895315 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph8g1344 K02863 - jre:108988389 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph8g1344 8 21890854 21895315 Enph8g1344 8 21890854 21895315 ECH