LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph8g1144	ATGGGAGTTGTAAGCTTTGAAATAAGTAGAAATTCAGCTTTTGCTTTTCATTATTCTGGAAATTCGTTTTCTTCTGGGGTTTCAATTTCTTGGATACCCTTTCTTGGTGCATCTTTAAACCTGAGAAATGCGAGGAAATATCAAGTTTTTCATTCTCAAAAGCTCAATTATGAACCAGTTAGTACTTCGTTGAAGAGTGGCTTCAAAGCTGGGTTCGTTAGTGATGGTCTTCTTTCAAATGAGTTAGAGTTTAAGCCATCCTTCGATGATTATTTGAAAGAAATGGAGTCTGCTAGAACTGTCAAGGAAATGGAGTCTTCAAGAAATGTTAGGGTAACGAAGCATGCTCGCAGTATTGAACAACAGAAGACGGAAAAGGTTATGTCGAGGAAACCGAAGTTGGAAGGAGATGAAGGGAGTAAAAAATTTGGAAAGCTTAGGGGGCGCATGGATAAAATGAATGAGTTAGGAATTACTCAAAAAGATGGAGCATTACAAGCAGTTAAAACAGTCATGGGCAAAGAAAGCTCCTACGTAGGTCATATTGAGCTCAGGGGACGGGGAGCTAAAAGATTTGAACCTAAGCTTGATGGGGAAGAAAGCGAGCTTGATATTACTGTACAGCAGAAAAAAGGGGCAGAGATGATGAAAGGCAGATGGTTGAAACACCAGATTAACAGATTGAAACCAGAATCTGATATTAAAAGGGAACCTAAAAGGATAGGCTATAGTAAAGCTTCTATTAATCGGAATAGTAACTGCAGCAACATCATAGAGGGGGAAGTTAGATATGAATTACATTCCTTAAAGACAGCAGAGGAAAAGGATGTTCTAACCAGCCAAAATGACCACAACTCAAAAGGGAAAATGCGTACGGTAAATAAAATTGTCGTGAGCAACAATACTATGCAAAACTCGCTTGAGAGAAGCTACACAAAAAATAAGGACGTACGGAAAGAAAAAGGACGGGAAATTGTCGAATTGAATGGAAGTGATAAGCACTTCCTTGATAGGTGCTATGATTGTGACAGCTTGGAGGGGGAAAGAGCAGCATTCAAGACTTTTCAGGAGTTCAATGGTGTTGTCAACAAGCCACAAGTTTCACACAAAGAAATGGAGGATAGAATCCAAAGGCTAGCAAATTCGTTGAATGGTGCTGATATCAATATGCCTGAATGGATCTTTTCTAAGATGATGAGAAGTGCAAAGATAAAATTTAATGATTATTCTATTGTGAGGGTTATCCAAAGATTGGGAAAACTAGGAAACTGGCAGCGAGTGATTCAGGTTGTTGAATGGCTTCAAAGGCGTGAGCGTTTCAAGTCAAATAAGCCAAGGCATATATATACTGCTGCTCTTGATGCACTTGGAAAGGCAAGGAGACCCATAGAGGCACTAAATGTATTTCATGCAATGCTGCAACAAATGTCCACATATCCTGATTTGGTAGCTTATCATAGTATCGCTGTCACTCTTGGTCAAGCAGGGCACATGAAGGAACTCTTTGATGTTATTGACATCATGCAACTGCCACCAAAGAAGTTCAAAGTAGGGGCACTTGGGAGCTGGGACTCTAGGTTGGAACCGGACATTATAGTTTATAATGCCGTCCTTAATGCCTGTGTTCAGCAAAAACAGTGGGAAGGGGCTTTCTGGGTTTTACAGCAGTTTAAGAAGCAAGGTCAACAACCTCCTGCTACAACTTATGGCCTTGTCATGGAGTTCTTGGAGGAAACTGTTGGAAATGCTGGTACCACTTTACATAACATTTACCACCTGGTGAAATTTGGTGAAAACAAACTTAGTGTGATGTTTACATGTGGCAAGTACGATCTAGTTCATGAATTTTTCATGAAAGTTAAGAAGTATTCTATTCCCAATTCATTGACATATAGAGGTACCATCATGTATTTTTATACATTCATATATATGCATATATATATAAAATCGTGTAATTTCATGATGATTTTGATCTTGACCATGATGTTATATCCAGTTCTTGTGAATACGCTGTGGAAAGAGGGTAAAACTGATGAGGCTATATTGGCTGTGCGAGAGATGGAAAGACGAGGAATTGTAGGCTCTGCTTCTCTTTATTATGACCTCGCTCGATGTCTTTGTGCAGCTGGAAGATGTAGTGACGCACTGATGCAGGTTGGATGGGGCTCCACCCCAACCCGATCTAGCTGTGTTAGCAGACCAGAGAGAAGTGCCAGTTGGTTATTCGATCAAATAGAGAAGATATGTAAGGTTGCAAACAAACCACTTGTAGTGACTTACACAGGCTTGATTCAAGCATGTCTAGAATCTGGAAACATCCTAGATGGGGCATACATTTTTGGAGAAATGAAGGATGTTTGCTCCCCAAATATTGTTACCTGTAACATGATGCTGAAAGCTTACCTCGAACATGGGATGTTTCAAGAGGCAACAGAATTGTTTGAGAAGATGTCAGAAAATACAAATCATGTGAAGAGAAATTCTGATTACAAGGTTTTGGTGATACCAGACATTTACACATTCAACACCATGCTAGATGCATGTATTGCAGAGAAGAGATGGGATTATTTTAACTACGTCTATCAAAAGATGCTATTTCATGGTTACCACTTCAATCCAAAACGGCATCTTCGAATGATATTGGAGGCATCAAGAGCTGGAAAGGAAGGACCTATTGAAACAACGTGGAAGCACCTGATCCTTACAGATCGTATTCTGCCAGCTCCTCTAATACTGGAAAGATTCTGTATGATGCTTGAAAGAGATGACCATATTGAAGCTCTTAGATGCATCACCAATGATCTCTCGAAAGACTTGCAGGCATTTTCTAAGAAGTCTTGGTCAAATCTATTGAAAGAAAATGCTCAACGTTTTCAGAAGGATACTCTTGTTAGGTTAATGGATGAGGTTAACATCCATGTTTCCAGAAGTAGCTTGCCACTTCCAGCGCTTGAAACACTTGAAAACCTAATGCTATCTTGGAGAGAATTTTGTACCACTGATCTTAGTGTAACTGACATGAAACTGTTGGTTAACCCTAGATGA	3045	0.3967	MGVVSFEISRNSAFAFHYSGNSFSSGVSISWIPFLGASLNLRNARKYQVFHSQKLNYEPVSTSLKSGFKAGFVSDGLLSNELEFKPSFDDYLKEMESARTVKEMESSRNVRVTKHARSIEQQKTEKVMSRKPKLEGDEGSKKFGKLRGRMDKMNELGITQKDGALQAVKTVMGKESSYVGHIELRGRGAKRFEPKLDGEESELDITVQQKKGAEMMKGRWLKHQINRLKPESDIKREPKRIGYSKASINRNSNCSNIIEGEVRYELHSLKTAEEKDVLTSQNDHNSKGKMRTVNKIVVSNNTMQNSLERSYTKNKDVRKEKGREIVELNGSDKHFLDRCYDCDSLEGERAAFKTFQEFNGVVNKPQVSHKEMEDRIQRLANSLNGADINMPEWIFSKMMRSAKIKFNDYSIVRVIQRLGKLGNWQRVIQVVEWLQRRERFKSNKPRHIYTAALDALGKARRPIEALNVFHAMLQQMSTYPDLVAYHSIAVTLGQAGHMKELFDVIDIMQLPPKKFKVGALGSWDSRLEPDIIVYNAVLNACVQQKQWEGAFWVLQQFKKQGQQPPATTYGLVMEFLEETVGNAGTTLHNIYHLVKFGENKLSVMFTCGKYDLVHEFFMKVKKYSIPNSLTYRGTIMYFYTFIYMHIYIKSCNFMMILILTMMLYPVLVNTLWKEGKTDEAILAVREMERRGIVGSASLYYDLARCLCAAGRCSDALMQVGWGSTPTRSSCVSRPERSASWLFDQIEKICKVANKPLVVTYTGLIQACLESGNILDGAYIFGEMKDVCSPNIVTCNMMLKAYLEHGMFQEATELFEKMSENTNHVKRNSDYKVLVIPDIYTFNTMLDACIAEKRWDYFNYVYQKMLFHGYHFNPKRHLRMILEASRAGKEGPIETTWKHLILTDRILPAPLILERFCMMLERDDHIEALRCITNDLSKDLQAFSKKSWSNLLKENAQRFQKDTLVRLMDEVNIHVSRSSLPLPALETLENLMLSWREFCTTDLSVTDMKLLVNPR	1014

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph8g1144	1014	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	660	694	IPR002885	-
	Enph8g1144	1014	Pfam	PPR repeat family	789	820	IPR002885	-
	Enph8g1144	1014	NCBIfam	pentatricopeptide repeat	792	820	IPR002885	-
	Enph8g1144	1014	NCBIfam	pentatricopeptide repeat	839	870	IPR002885	-
	Enph8g1144	1014	NCBIfam	pentatricopeptide repeat	758	785	IPR002885	-
	Enph8g1144	1014	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	790	820	IPR002885	-
	Enph8g1144	1014	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	530	564	IPR002885	-
	Enph8g1144	1014	Gene3D	Tetratricopeptide repeat domain	522	590	IPR011990	GO:0005515
	Enph8g1144	1014	Gene3D	Tetratricopeptide repeat domain	374	521	IPR011990	GO:0005515
	Enph8g1144	1014	ProSiteProfiles	Pentatricopeptide (PPR) repeat profile.	837	871	IPR002885	-
	Enph8g1144	1014	PANTHER	OS01G0674700 PROTEIN	661	1001	IPR044645	GO:0009658
	Enph8g1144	1014	Coils	Coil	369	389	-	-
	Enph8g1144	1014	FunFam	Pentatricopeptide repeat-containing protein	374	519	-	-
	Enph8g1144	1014	Pfam	PPR repeat	667	692	IPR002885	-
	Enph8g1144	1014	Pfam	PPR repeat	448	474	IPR002885	-
	Enph8g1144	1014	Pfam	PPR repeat	758	785	IPR002885	-
	Enph8g1144	1014	Gene3D	Tetratricopeptide repeat domain	723	898	IPR011990	GO:0005515
	Enph8g1144	1014	MobiDBLite	consensus disorder prediction	120	144	-	-
	Enph8g1144	1014	Pfam	Pentatricopeptide repeat domain	527	574	IPR002885	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph8g1144	Enph-Chr8	19547270	19557582	Dispersed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph8g1144	472	868	Glycosyltransferase	AT1G05670	20.142	1.64e-09	60.1

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph8g1144	-		-	aprc:113864568	1040.41