LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph6g0154	ATGGCTGAAACCGGTGCTGTCCGGTTTCCCGGTAGCTTAGATCCCGGTGCGGAAGAGTTCACGCCCAGAAATCAAACGCTTTACATGCCGACTCAACTGTTCTACCCTTACGCAACCACTTCTGGGGTTCAGCTTCAGCCTGTGCCCTTTTGTAATGCTGCTCCTGTTGGTGTTCAGTATCCGCAGTTCTGTTCCCCTGCGGCGTACGTTGGCCCGCTGGCGCCGCCGGCTGCGCCGTCTTCACACCCGCCTACGCGGTCTCTGCTGCTCAGCTCTGTGCCGGTGGAGGTGGTGAGCGAGTCGATGTTGAGGAGGGAATTGGAGGTGTTTGGGGATGTGAGAGGGGTGCAGATGGAGAGGTTGCGGGAAGGAATGGTGACCGTTCATTTCTATGACTTGAGACATGCAGAGTCGGCGTTGATGGCGATTCGGAAGCAGCACATGCAACAACAGACCAGGCTTCGCAATTACTATGCTTCCGTGATGAAGTCTCGCAATTCGGCGTTGGAGTCGGATTGTTACGCCCATCTGGCTCCTCTGCCACCGCCGGCGCGTGGGCTGGTATGCGGTCGTGCGGTGTGGGCCCAGTACATTGTCCCGGCGTGTAACGCCGTTCCTGAAGGCCAAAATCAAGGGACCATCGTGGTTTTCAATTTGGATTCGGAGGTGTCTGCGGAGACGCTCCGACATACTTTCGAGGCATTTGGTCCAGTGAGGGAATTGAGACATACTCCATTGAAAAAGAATCAGAGGTTTGTGGAGTTCTTTGACATCAGAGACGCAGCTAAAGCTTTGAAGGAAATGAACGGCAAACAAATTAACGGTAAAAATGTTGTTATCCAGTTCAGTCGTCCTGGTGGTCATGGCAGGAAGTTCTTCAACCCCCCTGCGTTCTCCAAAAACGCAATGCCGTTCAGTTTCCAACCTCCTTCTCCACCGCCATTAGCGCGCAAAAACGCACGTCGTTTCGCTCCTGTTGCTCCTCCTCGCACTCATCTCCCTCAACCCCAATTGGCGTCCAAGAAACCGACTGTTACAAAGGGAAACAGTAACACGAATCTGGAGAGTGTTCAGAGAAGTGTAAATTCTGGTTCAGTGGAAACGACAATGAGTCTGACGAATATGAATGGAGTTGAAGAGAAGCAATCGGAAGGGCCTGCGACGAGAGACGCTGTGAAAAGCTGTAGCAGCGAGATGGTGGCGGGAAGCACGAAGCAGCAGCAGCAAGCTAGAAGTAGGAATTGGAAGGGAAAGCAAGGGAAGAAGCAGGAAACTCGGTTTCTGATAAAAGAAGATGCTATTGTGGAATCAAGTTGCAAAGATTCCAGAACTACTGTCATGATCAAGAACATACCCAACAAGTACAGTCAGAAGCTACTATTGAACATGCTGGACAACCACTGCATTCACTGCAACGAGCAGATTGCCGACGGCGACGACCAACCCTTGTCCTCTTACGACTTCGTTTACCTCCCCATTGATTTCAACAACAAATGCAATGTGGGATATGGGTTCGTGAACATGACATCACCGGAGGCGACACTGAGGCTCTACAAGGCATTCCATCTTCAACATTGGGAAGTTTTCAACTCCAGAAAAATATGCGAAGTCACATACGCAAGAGTTCAGGGTTTGGAAGCATTGAAAGAGCACTTCAAGAACTCGAAGTTCCCATGCGAGATAGAGCATTACTTGCCGGTGGTGTTTTCGCCGCCTCGAGATGGGACGCAGCTGACGGAGCCACTGCCAATCGTTGGTCAGAAGCCGCAAGGAGTAGCCATTAATGATGGTGGTGATGATGAGAGTAGAGTAGGTGGTTGTGACGGCGGCGAGCAGCATGGTATGCAGAACAACAGCGAAAACGGCGGCGGGGATGGTGATGAAGAGAGAGGAAGCGGCGGAGGAAGAGGAGAAGAAGTTGGAAGAGATAAGGAGTAA	1938	0.516	MAETGAVRFPGSLDPGAEEFTPRNQTLYMPTQLFYPYATTSGVQLQPVPFCNAAPVGVQYPQFCSPAAYVGPLAPPAAPSSHPPTRSLLLSSVPVEVVSESMLRRELEVFGDVRGVQMERLREGMVTVHFYDLRHAESALMAIRKQHMQQQTRLRNYYASVMKSRNSALESDCYAHLAPLPPPARGLVCGRAVWAQYIVPACNAVPEGQNQGTIVVFNLDSEVSAETLRHTFEAFGPVRELRHTPLKKNQRFVEFFDIRDAAKALKEMNGKQINGKNVVIQFSRPGGHGRKFFNPPAFSKNAMPFSFQPPSPPPLARKNARRFAPVAPPRTHLPQPQLASKKPTVTKGNSNTNLESVQRSVNSGSVETTMSLTNMNGVEEKQSEGPATRDAVKSCSSEMVAGSTKQQQQARSRNWKGKQGKKQETRFLIKEDAIVESSCKDSRTTVMIKNIPNKYSQKLLLNMLDNHCIHCNEQIADGDDQPLSSYDFVYLPIDFNNKCNVGYGFVNMTSPEATLRLYKAFHLQHWEVFNSRKICEVTYARVQGLEALKEHFKNSKFPCEIEHYLPVVFSPPRDGTQLTEPLPIVGQKPQGVAINDGGDDESRVGGCDGGEQHGMQNNSENGGGDGDEERGSGGGRGEEVGRDKE	645

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph6g0154	645	MobiDBLite	consensus disorder prediction	326	423	-	-
	Enph6g0154	645	MobiDBLite	consensus disorder prediction	578	645	-	-
	Enph6g0154	645	Gene3D	-	79	160	IPR012677	-
	Enph6g0154	645	SMART	rrm1_1	87	155	IPR000504	GO:0003723
	Enph6g0154	645	SMART	rrm1_1	213	281	IPR000504	GO:0003723
	Enph6g0154	645	MobiDBLite	consensus disorder prediction	337	381	-	-
	Enph6g0154	645	SUPERFAMILY	RNA-binding domain, RBD	72	148	IPR035979	GO:0003676
	Enph6g0154	645	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	212	285	IPR000504	GO:0003723
	Enph6g0154	645	MobiDBLite	consensus disorder prediction	397	414	-	-
	Enph6g0154	645	Pfam	RNA recognition motif 2	443	553	IPR007201	-
	Enph6g0154	645	Gene3D	-	392	547	IPR012677	-
	Enph6g0154	645	Pfam	RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)	214	278	IPR000504	GO:0003723
	Enph6g0154	645	Gene3D	-	205	291	IPR012677	-
	Enph6g0154	645	FunFam	Terminal EAR1-like 1	392	549	-	-
	Enph6g0154	645	MobiDBLite	consensus disorder prediction	623	645	-	-
	Enph6g0154	645	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	86	161	IPR000504	GO:0003723
	Enph6g0154	645	PANTHER	RNA RECOGNITION MOTIF-CONTAINING	440	570	-	-
	Enph6g0154	645	SUPERFAMILY	RNA-binding domain, RBD	212	521	IPR035979	GO:0003676
	Enph6g0154	645	CDD	RRM3_EAR1_like	443	544	IPR034458	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph6g0154	Enph-Chr6	4837628	4840249	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph6g0154	-		-	cave:132177690	704.516

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Enph6g0154	6	4837628	4840249	Enph6g0154	6	4837628	4840249	ECH