Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph2g2548 ATGGGTCCTGGTTCCAAAGTGGGGAATAGCAGTCTTGATTACTCTTTTAAGGTATTATTGATTGGTGATTCTGGGGTTGGCAAGAGCAGTCTTCTTCTCAGCTTCATTTCCAGCTCTGTTCATGACCTCTCCCCCACTATTGGTGTAGACTTCAAGCTCAAGCTCCTTACAAGTGCTGGTAAAAGATTGAAACTTACTATCTGGGACACAGCGGGCCAGGAGAGGTTTGGAACGGTAATAAGCTCTTACTACAGAGGTGCACATGGAATCATTCTTGTCTATGACGTGACACGGCGTGAAACATTTACAAACTTGGAGGACTTATGGACGAAAGAAGTTGAACGGTACAGCACTAATCCTGAGTGCATCAAAGTTCTAGTTGGGAACAAGGTGGATAAGGACAGTGAAAGGGTTGTAGCCAAGGAAGAGGGTATGGCTCTTGCTCAGAAACATAGATGCTTATTCCTTGAGTGTAGTGCTAAAACTAGAGAAAATGTTCAGCAATGCTTTAACGATCTCTCCTTAAAGATGTTAGAGGTACCGAGTTTGCGGGAAAAAGGGTCTGTAGCAGTGAAGAGACAGAAGCAAAAGCACATATATGAACGGACGCATCAAGGTGGAGGATGTTGTTTAGAGTAA 639 0.4382 MGPGSKVGNSSLDYSFKVLLIGDSGVGKSSLLLSFISSSVHDLSPTIGVDFKLKLLTSAGKRLKLTIWDTAGQERFGTVISSYYRGAHGIILVYDVTRRETFTNLEDLWTKEVERYSTNPECIKVLVGNKVDKDSERVVAKEEGMALAQKHRCLFLECSAKTRENVQQCFNDLSLKMLEVPSLREKGSVAVKRQKQKHIYERTHQGGGCCLE 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph2g2548 212 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 188 IPR027417 -
Enph2g2548 212 Pfam Ras family 17 177 IPR001806 GO:0003924|GO:0005525
Enph2g2548 212 Gene3D - 7 207 IPR027417 -
Enph2g2548 212 FunFam Ras-related protein RABC1 9 210 - -
Enph2g2548 212 PRINTS Transforming protein P21 ras signature 120 133 - -
Enph2g2548 212 PRINTS Transforming protein P21 ras signature 38 54 - -
Enph2g2548 212 PRINTS Transforming protein P21 ras signature 56 78 - -
Enph2g2548 212 PRINTS Transforming protein P21 ras signature 16 37 - -
Enph2g2548 212 PRINTS Transforming protein P21 ras signature 155 177 - -
Enph2g2548 212 PANTHER RAS-RELATED PROTEIN RAB 15 190 - -
Enph2g2548 212 SMART ran_sub_2 21 211 - -
Enph2g2548 212 SMART rho_sub_3 18 180 IPR001806 GO:0003924|GO:0005525
Enph2g2548 212 ProSiteProfiles small GTPase Ras family profile. 10 211 IPR001806 GO:0003924|GO:0005525
Enph2g2548 212 SMART rab_sub_5 16 180 - -
Enph2g2548 212 ProSiteProfiles small GTPase Rho family profile. 9 178 - -
Enph2g2548 212 ProSiteProfiles small GTPase Rab1 family profile. 11 212 - -
Enph2g2548 212 SMART ras_sub_4 13 180 - -
Enph2g2548 212 NCBIfam small GTP-binding protein domain 14 171 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph2g2548 Enph-Chr2 41994935 41998996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Enph2g2548 15 170 EF-hand Containing Proteins AT5G27540 28.395 6.51e-12 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph2g2548 K07910 - gmx:100500172 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph2g2548 2 41994935 41998996 Enph2g2548 2 41994935 41998996 ECH