Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph2g1165 ATGTTTCATGAGCAAGCTGCTCCTGCAGTCACCCCTAGGTCTACTAGTTCTGCAGCCAAGCATTTTCCCACCTCAGTCCTCGTACAAGAGCAACATGATGAGTACAGACCTATGCTGCATATATATAAGGAAGAAAAGGCATCCCAGATGGATATGACCTCAGTTAATGAAGATAACAGCCCAGGCAATGCTGATCAGTTAGTGCATGACTCTAAACAGCAATTGCAAATTTGGCCTTGTTTAAGTAACTTGTTGACTTCCTCACCAACTGATGAAATTACAACATCTTCGACTCTGCACCCTGTTACTCTTCACTCAGTGAATCCTGCAGAAGGTGATGAGCATGATGCAGTCGATCTTGCTAAGCAAGCATTGTCAGCATCAAAACAAGCTGTCTTGGCAGCTGAAGACTTGAAATCAATCAAAGCTAATGATGATGTTTTACTTCCTCTAGGTTTGGCCTCCACAAGTTTTGATGACTTTTCAGCTGGAAAGAATAAAACTGTTAGGTCAACACGGCTTCTAGAGAGACAATCAAAGATGAGAAAAAAATCAAAGGCAAAATTCTTAGATGAAGAAAGCTATCTTGCTAAAAAGGCAGAAGTAAAGGGAAGGTTACTTGCAGAAAAGAAGATAAATGAAGGGTTTGATCAAAATGATCCCCTGCGCTTGTTCCTATGGGGTCCTGAAACAAAGCAACTTTTGACTCTTGAAGAAGAATCTCAATTGATTCTTCAGCTACAGGATTTATTGAGATTTGAAGAAGTAAAGAAAAGGCTTCAATCTCAATTTGGGCGGGAACCAACTTTGGCTGAGTGGGCTAATGGTGTGGACCTTACCTGTCGAGCGCTACAGTTACGGCTTCATTCTGGTAACAGCTGCAGAGAGAAGCTGATTTATGCAAATTTGCGAATGGTAGTTCACATTGCTAAACATTATCAGGGGCGTGGTCTCGGTTTTCAGGACTTGTTGCAGGAGGGAAGTATGGGGCTTATGAAGAGTGTTGAAAAGTTTAAACCACAAGCAGGTTGCCGATTTGGTACTTATGCCTACTGGTGGATAAGGCAAACAATTAGGAAGGCCATATTTCAACATTCCAGGACCATTCGTCTACCGGAGAATGTATATACCCTTTTGGGGAAGGTGTCGGAGGCAAAGAAATTATACATTCGAGAAGGAAATCTTCATCCCACTAAAGAAGAACTAGCAAGAAGGGTAGGAATGACAGTAGAGAAATTGGAAAAGTTGCTATTTGTTGCAAGAATTCCAATCTCGATGCAACAAACTGTGTGGGCAGACCAAGATACCACTTTCCAGGAGGTTACTGCAGACCCGGCAATTGAGAGCCCAGATGTGTGTGTTGCAAGACAGATGATGAGGCGGCATATGCGAAACCTCTTAAGCATCTTGAGTCCAAAAGAAAGGAGGATAATCCGGCTAAGATTTGGTATCGAGGATGGTAAACAGAAATCATTATCAGAGATTGGAAACATATTTGGTTTGTCTAAGGAAAGGGTTCGACAGTTAGAGAGCCGAGCATTGTACAAGCTGAAGCAGTGCCTTGGCAGCCAGGGACTTGATGCATATGCAGAATTGCTTGTGTAG 1605 0.4255 MFHEQAAPAVTPRSTSSAAKHFPTSVLVQEQHDEYRPMLHIYKEEKASQMDMTSVNEDNSPGNADQLVHDSKQQLQIWPCLSNLLTSSPTDEITTSSTLHPVTLHSVNPAEGDEHDAVDLAKQALSASKQAVLAAEDLKSIKANDDVLLPLGLASTSFDDFSAGKNKTVRSTRLLERQSKMRKKSKAKFLDEESYLAKKAEVKGRLLAEKKINEGFDQNDPLRLFLWGPETKQLLTLEEESQLILQLQDLLRFEEVKKRLQSQFGREPTLAEWANGVDLTCRALQLRLHSGNSCREKLIYANLRMVVHIAKHYQGRGLGFQDLLQEGSMGLMKSVEKFKPQAGCRFGTYAYWWIRQTIRKAIFQHSRTIRLPENVYTLLGKVSEAKKLYIREGNLHPTKEELARRVGMTVEKLEKLLFVARIPISMQQTVWADQDTTFQEVTADPAIESPDVCVARQMMRRHMRNLLSILSPKERRIIRLRFGIEDGKQKSLSEIGNIFGLSKERVRQLESRALYKLKQCLGSQGLDAYAELLV 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph2g1165 534 Gene3D - 453 533 IPR036388 -
Enph2g1165 534 Gene3D - 122 367 - -
Enph2g1165 534 PANTHER RNA POLYMERASE SIGMA FACTOR RPO 113 530 - -
Enph2g1165 534 CDD Sigma70_r4 460 518 - -
Enph2g1165 534 Pfam Sigma-70, region 4 466 519 IPR007630 GO:0003700|GO:0006352|GO:0006355
Enph2g1165 534 ProSitePatterns Sigma-70 factors family signature 2. 491 517 IPR000943 GO:0003700|GO:0006352|GO:0006355
Enph2g1165 534 SUPERFAMILY Sigma2 domain of RNA polymerase sigma factors 218 368 IPR013325 GO:0003700|GO:0006352|GO:0006355
Enph2g1165 534 PIRSF Sigma_factor_SigC 2 534 IPR016262 -
Enph2g1165 534 SUPERFAMILY Sigma3 and sigma4 domains of RNA polymerase sigma factors 431 529 IPR013324 -
Enph2g1165 534 ProSitePatterns Sigma-70 factors family signature 1. 322 335 IPR000943 GO:0003700|GO:0006352|GO:0006355
Enph2g1165 534 NCBIfam sigma-70 family RNA polymerase sigma factor 294 521 IPR014284 GO:0003700|GO:0006352|GO:0006355
Enph2g1165 534 SUPERFAMILY Sigma3 and sigma4 domains of RNA polymerase sigma factors 371 444 IPR013324 -
Enph2g1165 534 Pfam Sigma-70 region 3 378 451 IPR007624 GO:0003700|GO:0006352|GO:0006355
Enph2g1165 534 Gene3D - 371 448 IPR036388 -
Enph2g1165 534 PRINTS Major sigma-70 factor signature 506 517 IPR000943 GO:0003700|GO:0006352|GO:0006355
Enph2g1165 534 PRINTS Major sigma-70 factor signature 346 354 IPR000943 GO:0003700|GO:0006352|GO:0006355
Enph2g1165 534 PRINTS Major sigma-70 factor signature 322 335 IPR000943 GO:0003700|GO:0006352|GO:0006355
Enph2g1165 534 PRINTS Major sigma-70 factor signature 470 482 IPR000943 GO:0003700|GO:0006352|GO:0006355
Enph2g1165 534 PRINTS Major sigma-70 factor signature 491 506 IPR000943 GO:0003700|GO:0006352|GO:0006355
Enph2g1165 534 Pfam Sigma-70 region 2 299 367 IPR007627 GO:0003700|GO:0006352|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph2g1165 Enph-Chr2 9727607 9733766 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph2g1165 - - aip:107648612 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph4g1696 4 29479867 29501403 Enph2g1165 2 9727607 9733766 CCT
Enph2g1165 2 9727607 9733766 Enph2g1165 2 9727607 9733766 ECH