Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph1g1646 ATGGCGATGGACTGCTTCCCTGCCCTCCGCCATTTCCTACGTCGCGTATACTGGTTCTCTCTATCTCCTCCTCCACGCCCAGCCATATCTTTACGGTTAAGCCCTTCCTTTTGTTCTACCTGCTTTTTTTCCTCTAAATCCACCAGTCAAACCTCTGGAGTTTTTAAATCCCGTGCCACTTCCAAAGAGAACTACACTTTCTTTCTGAAGAAAGATGAGCGCTTGGCGGACTCTGTTAGTGCTGCTCATGAGCTCGATCGTGTTCAGAACACGAGCACAATTGCGGCCATTGTCACATCCTTGGGGGGGCTCCCTGGTGCTGTTGGAATCGTTCGACTTTCGGGGCCTTCCGCTGTGGCTATTGTTGGTCGAGTGTTTCGACCCGCCAGGAAACGGAGGAAGAGGACGTGGCAACCCATGAGCCATGTTGTAGAGTATGGTATGGTGCTTGATACAGATGGGAATGTGATTGATGAGGTTTTAGTAGTACCCATGTTAGCCCCGAGGTCTTACACTCGTGAAGACGTGATTGAGCTTCAGTGTCATGGGAATGAAGTGTGTCTACGCCGTGTATTGAAAACTTGTTTGGAAGCTGGAGCTAGACTTGCTGAACCAGGGGAATTTACTATACGTGCTTTTCTGAATGGTCGGTTAGATCTATCCCAAGCTGAAAATGTTGGAAGACTAATAACAGCCAAATCTGGTGGTTTCTCTTCTCTTGTCAAGTCACTGAGAATACAGTGCATTGAGCTGCTTACTGAGATTGAAGCTCGTTTAGATTTTGATGATGAGATGCCACCTCTAGATTTAAATCTTGTTGTGGATAAAATCCATATCATGTCAAAAGATATAGCAATTGTTGGCCGTCCAAATGTTGGCAAGTCAAGCCTTCTTAATGCATGGAGCAAAACTGAGAGGGCTATAGTTACTGAAATTGCTGGAACCACCCGGGATGTGATTGAAGCAAGTGTCAGCATCAATGGTATTCCTGTAATCCTGCTTGATACTGCTGGAATCAGGGATACTGATGACATTGTAGAAAGGATTGGCATAGAGAGATCTGAAGCAGTTGCTATGGGTGCTGACATGATTGTCATGATTGTGAGTGCTGTTGAAGGGTGGACATTGGAAGACACCAAACTTTTAGAAAGGATTCAATCTACGAAGAGATCGACAGGATCTTCCACCCCTTCAATTCTTGTGGTCAACAAGATAGATTGTACTCCTGCTGCTGAGATTGAATGGGCTAAAATACGTTCCAATCTTTTCAGTAAATGTGTGTTTACATGTGCTGTCACTGGCGAGGGATTACAAGAGTTAGAGAGTGCTGTGTTAGAGCTTGAGGGTCTGAACAGCATCCCCACTGGGGGACGTAAATGGACTGTTAATCAGAGACAGTGCGAACAACTTGTTCGGACAAAGGAAGCTTTTGAAAGACTGAAAGCATCTATAGAGGAGAAACTACCTCTGGATTTTTGGACAATTGATTTAAGGGATGCAACATTGGCGCTTGGGCAGATCAGTGGAGAAGATATATCGGAAGAGGTTTTATCTAATATATTTGGCAAGTTCTGTATTGGTAAATAG 1587 0.448 MAMDCFPALRHFLRRVYWFSLSPPPRPAISLRLSPSFCSTCFFSSKSTSQTSGVFKSRATSKENYTFFLKKDERLADSVSAAHELDRVQNTSTIAAIVTSLGGLPGAVGIVRLSGPSAVAIVGRVFRPARKRRKRTWQPMSHVVEYGMVLDTDGNVIDEVLVVPMLAPRSYTREDVIELQCHGNEVCLRRVLKTCLEAGARLAEPGEFTIRAFLNGRLDLSQAENVGRLITAKSGGFSSLVKSLRIQCIELLTEIEARLDFDDEMPPLDLNLVVDKIHIMSKDIAIVGRPNVGKSSLLNAWSKTERAIVTEIAGTTRDVIEASVSINGIPVILLDTAGIRDTDDIVERIGIERSEAVAMGADMIVMIVSAVEGWTLEDTKLLERIQSTKRSTGSSTPSILVVNKIDCTPAAEIEWAKIRSNLFSKCVFTCAVTGEGLQELESAVLELEGLNSIPTGGRKWTVNQRQCEQLVRTKEAFERLKASIEEKLPLDFWTIDLRDATLALGQISGEDISEEVLSNIFGKFCIGK 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph1g1646 528 Coils Coil 467 487 - -
Enph1g1646 528 PANTHER TRNA MODIFICATION GTPASE GTPBP3 74 528 - -
Enph1g1646 528 NCBIfam small GTP-binding protein domain 283 409 IPR005225 GO:0005525
Enph1g1646 528 Gene3D tRNA modification GTPase MnmE domain 2 218 528 IPR027368 -
Enph1g1646 528 FunFam tRNA modification GTPase MnmE 282 456 - -
Enph1g1646 528 ProSiteProfiles TrmE-type guanine nucleotide-binding (G) domain profile. 281 449 IPR031168 -
Enph1g1646 528 Pfam GTP-binding protein TrmE N-terminus 93 217 IPR018948 -
Enph1g1646 528 Hamap tRNA modification GTPase MnmE [mnmE]. 92 528 IPR004520 GO:0003924|GO:0005525|GO:0006400
Enph1g1646 528 CDD trmE 284 447 IPR031168 -
Enph1g1646 528 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 444 IPR027417 -
Enph1g1646 528 CDD TrmE_N 92 216 IPR018948 -
Enph1g1646 528 FunFam tRNA modification GTPase MnmE 88 217 - -
Enph1g1646 528 Pfam MnmE helical domain 232 525 IPR025867 -
Enph1g1646 528 Gene3D Probable tRNA modification gtpase trme; domain 1 78 217 IPR027266 GO:0005515
Enph1g1646 528 Gene3D - 284 456 IPR027417 -
Enph1g1646 528 NCBIfam tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE 106 528 IPR004520 GO:0003924|GO:0005525|GO:0006400
Enph1g1646 528 Pfam 50S ribosome-binding GTPase 283 404 IPR006073 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph1g1646 Enph-Chr1 41684358 41689120 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph1g1646 K03650 - gmx:100818096 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph1g1646 1 41684358 41689120 Enph1g1646 1 41684358 41689120 ECH