Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph1g1026 ATGCTCCAGCTTTACTGTTGTCCATGTCGCAGTGCTTTTACAGCATTGTCTTTTCGTACCACACCTACTCTCTTCTCCGCTAGGGGTCGGAATCATAAGTTTCCTCACGGTATTGCGCGAACAGTCAGAAGCAGTGCCGGCCTCGTTGGGTACTCAGACTCCGATGGAGAGCAACAAACGGTCTTTGCGAAGAGGACGAATTATGCCGGCGTGCAGCTGGTGGAGACTGTCGATACCGATTCAGGAAAACTCAGGCTCGATTCTTGGATCTCTTCCCGCATCAGCGGCATAAGTAGGGCTCGCGTGCAGTCAAGTATTAGAGCGGGGCTCGTTCATGTCAACGGCCGTGTTGTTGATAAGGTTTCTTTCAATGTCAAGGCTGGGGATAAGATCAATTGCACGATTTCAGAGTTACAACAGTTGAGAGCTGAGCCAGAACATATGCTGTTGGATATTGTTTATGAAGATGAGCATGTTCTAGTAATTAACAAACCTGCACACATGGTTGTGCATCCAGCACCTGGAAATACATCCGGTACTCTTGTCAATGGCATTCTTCATCATTGCAATCTTCCAAATATTGAAATTTCTAACAAGGAAGTTCTTTCAGAGACTGAAGATTTCGATGATTTTGATGGCTTCTCTATTGATCCAAGTTCCAGTGAAGGATCACAATCAGATTCCAGAATGTATGGATTATCAGTCCGTCCAGGGATTGTGCATAGGCTGGATAAAGGCACTAGTGGATTGCTTGTTGTAGCAAAGGATGAACATTCCCATAATCATTTATCAGACCAATTCAAGCTACGTACTATCAAGAGGGTGTATGTCAGTCTCACTGTTGGTGTTCCCTCTCCTACTGCTGGGCGTGTTGAGGTTCCAGTTGGTCGTGATCCTAATAACCGGGTTCGAATGACTGCTGTAGCCGGATCACTTAATTCTAGAAAAGCTCGTTATGCTGCTAGTAGGTACAAAGCAATTGAGATACTTGCACAGGGTGCTTGTGCATTGCTTGAATGGAAGCTAGAAACCGGGCGCACCCATCAGATACGTGCACATTCCAAGTATCTAGGAGTTCCTCTGCTGGGTGATGAGGTTTACGGAGGGACAAAGAGCAAGGCCTTATCACTACTTCAGCCTAGAACACCGATGAGCCTACGTGGCAAAATTTTACAAATGGTTTCGAGGGTAGATAGGCCGTGCCTTCATGCTTTGACTCTAGGGTTTCGGCATCCCCATACAGGGGAGCAGTTACATTTTTCATGCCAACCCCCTGCAGACTTCGATGAAATTTTGAGGCAGCTTCGGACAATTGGCTGTGAGAGGCTATCTTCCTTGCGGCCTTGA 1347 0.4662 MLQLYCCPCRSAFTALSFRTTPTLFSARGRNHKFPHGIARTVRSSAGLVGYSDSDGEQQTVFAKRTNYAGVQLVETVDTDSGKLRLDSWISSRISGISRARVQSSIRAGLVHVNGRVVDKVSFNVKAGDKINCTISELQQLRAEPEHMLLDIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNIEISNKEVLSETEDFDDFDGFSIDPSSSEGSQSDSRMYGLSVRPGIVHRLDKGTSGLLVVAKDEHSHNHLSDQFKLRTIKRVYVSLTVGVPSPTAGRVEVPVGRDPNNRVRMTAVAGSLNSRKARYAASRYKAIEILAQGACALLEWKLETGRTHQIRAHSKYLGVPLLGDEVYGGTKSKALSLLQPRTPMSLRGKILQMVSRVDRPCLHALTLGFRHPHTGEQLHFSCQPPADFDEILRQLRTIGCERLSSLRP 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph1g1026 448 Pfam RNA pseudouridylate synthase 158 354 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Enph1g1026 448 Gene3D - 70 140 IPR036986 GO:0003723
Enph1g1026 448 ProSiteProfiles S4 RNA-binding domain profile. 84 157 - -
Enph1g1026 448 PANTHER MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE 88 434 - -
Enph1g1026 448 Pfam S4 domain 85 131 IPR002942 GO:0003723
Enph1g1026 448 CDD S4 85 163 - -
Enph1g1026 448 SMART s4_6 84 142 IPR002942 GO:0003723
Enph1g1026 448 SUPERFAMILY Pseudouridine synthase 145 436 IPR020103 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Enph1g1026 448 Gene3D Pseudouridine synthase 151 200 - -
Enph1g1026 448 Gene3D Pseudouridine synthase 213 439 - -
Enph1g1026 448 CDD PseudoU_synth_RluA_like 159 409 IPR006145 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Enph1g1026 448 FunFam RNA pseudouridine synthase 2 chloroplastic 71 139 - -
Enph1g1026 448 ProSitePatterns Rlu family of pseudouridine synthase signature. 240 254 IPR006224 GO:0001522|GO:0003723|GO:0009451|GO:0009982
Enph1g1026 448 SUPERFAMILY Alpha-L RNA-binding motif 84 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph1g1026 Enph-Chr1 36494285 36498293 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph1g1026 K06180 - gmx:100810383 584.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph1g1026 1 36494285 36498293 Enph1g1026 1 36494285 36498293 ECH