LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph14g0310	ATGGCTTTAAGTCTTCGTTCTTCAAATTCCTTCTTTTCTCAGATAGAAACCAAAGTCTCCAAAACTTCTGACGACTTCCCTTCCACAGTTTGCTTTGCAAGGATCAAGCCATCATCATCGTTCCGTCTCGGAGCAAAGAACAGGGTGCAAGAACCATATGTGGCGGTGGCCGACAACATGGTCAGCTCAGAGACGAAGCTGCATCCGCCATTGGTTGCTCATGCTCACGATGATTCGATGAGAGTGCCTGTGTTTGTGATGTTGCCATTAGACACAGTGACGATGGGAGGGACTCTGAACAAGGCACGAGCCATGAATGCTAGTTTGATGGCCCTCAAGAATGCAGGAGTAGAAGGAGTAATGGTGGATGCATGGTGGGGTTTGGTAGAAAAAGATGGCCCTCTCAAGTATAACTGGGAACCCTACGCTGAACTTGTTCACATGGCACAGAAGCATGGATTGAAACTTCAAGTCGTCATGTCTTTCCATCAGTGTGGAGGAAATGTCGGCGACTCCTGCAGTATCCCTCTACCTCCATGGGTGCTTGAAGAAATCAGCAAAAACCCCGACCTGGTTTACACAGACAGATCTGGGAGGAGAAATCCTGAGTACATCTCCTTGGGGTGTGATTTCATACCTGTTCTAAGAGGAAGGACGCCTCTTCAGGTGTACTCTGACTTCATGACTAGTTTCCGTGACCGATTCAGAGATTACTTGGGCAGTGTTATCTCAGAAATTCAAGTAGGGATGGGTCCTTGTGGAGAGCTCAGATATCCATCTTATCCTGAAAGCAATGGAACCTGGAGGTTTCCTGGAATTGGTGAATTCCAGTGCTACGACAAGTATATGAGGGCGTCGTTGGAAGCAGCAGCAGAGGCGATAGGGAACAGGGAATGGGGGAGAAGTGGACCGCACGATTCCGGCCAATATAATCAATTTCCGGAAGATACGGGATTCTTCAGACGCGAAGGAACGTGGAGCTCCGACTATGGGACCTTCTTCCTCACCTGGTACTCCAACAAACTCCTCGACCACGGCGACAGAATCCTCGAATCGGCCAACCGGATTTTCGAATCCACCGGGGTCAAACTCTCCGCCAAGATCGCCGGCATTCATTGGCATTACACGACAAGATCTCACGCCGCCGAGCTAACCGCCGGCTACTACAACACCCGATTCCACGACGGCTACCTCCCGATCGCACAAATGCTGGCGAAACACGGAGCCATCTTCAATTTCACGTGCATGGAGATGAAGGATCCGCAGCAACCTCAGCACGCGAATTGCTCGCCGGAGGGTCTGGTTGGACAGGTGAAGATGGCGACGAGGACGGCGAGGGTACAACTTGCAGGGGAGAACGCGTTGGAGAGGTACGATTGGGATGGGTACGGACAGGTGATGGAAACGAGCAGATTGGAGTGTGGGAACGGATTGGCTTCCTTCACGTATCTGAGGATGAATAAGAGGTTGTTCGACGGTGAGAATTGGCGCCATTTTGTGGATTTCGTGAGAAGTATGTCGGAGGGTGGCCGGAGACACAGACTTCCAGATTATGACTCGTCGGGGACTGATCTTTACGTTGGACACATTAATCGGATTCATCGGAAGCATGTTCAAGAGGTTGCTCTTGTGTGA	1635	0.5064	MALSLRSSNSFFSQIETKVSKTSDDFPSTVCFARIKPSSSFRLGAKNRVQEPYVAVADNMVSSETKLHPPLVAHAHDDSMRVPVFVMLPLDTVTMGGTLNKARAMNASLMALKNAGVEGVMVDAWWGLVEKDGPLKYNWEPYAELVHMAQKHGLKLQVVMSFHQCGGNVGDSCSIPLPPWVLEEISKNPDLVYTDRSGRRNPEYISLGCDFIPVLRGRTPLQVYSDFMTSFRDRFRDYLGSVISEIQVGMGPCGELRYPSYPESNGTWRFPGIGEFQCYDKYMRASLEAAAEAIGNREWGRSGPHDSGQYNQFPEDTGFFRREGTWSSDYGTFFLTWYSNKLLDHGDRILESANRIFESTGVKLSAKIAGIHWHYTTRSHAAELTAGYYNTRFHDGYLPIAQMLAKHGAIFNFTCMEMKDPQQPQHANCSPEGLVGQVKMATRTARVQLAGENALERYDWDGYGQVMETSRLECGNGLASFTYLRMNKRLFDGENWRHFVDFVRSMSEGGRRHRLPDYDSSGTDLYVGHINRIHRKHVQEVALV	544

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph14g0310	544	Pfam	Glycosyl hydrolase family 14	85	502	IPR001554	GO:0000272\|GO:0016161
	Enph14g0310	544	PRINTS	Beta-amylase (glycosyl hydrolase family 14) signature	137	155	IPR001554	GO:0000272\|GO:0016161
	Enph14g0310	544	PRINTS	Beta-amylase (glycosyl hydrolase family 14) signature	326	345	IPR001554	GO:0000272\|GO:0016161
	Enph14g0310	544	PRINTS	Beta-amylase (glycosyl hydrolase family 14) signature	251	273	IPR001554	GO:0000272\|GO:0016161
	Enph14g0310	544	PRINTS	Beta-amylase (glycosyl hydrolase family 14) signature	116	130	IPR001554	GO:0000272\|GO:0016161
	Enph14g0310	544	PRINTS	Beta-amylase (glycosyl hydrolase family 14) signature	159	180	IPR001554	GO:0000272\|GO:0016161
	Enph14g0310	544	PRINTS	Beta-amylase (glycosyl hydrolase family 14) signature	362	378	IPR001554	GO:0000272\|GO:0016161
	Enph14g0310	544	PRINTS	Beta-amylase (glycosyl hydrolase family 14) signature	379	390	IPR001554	GO:0000272\|GO:0016161
	Enph14g0310	544	PRINTS	Beta-amylase (glycosyl hydrolase family 14) signature	434	456	IPR001554	GO:0000272\|GO:0016161
	Enph14g0310	544	PRINTS	Beta-amylase (glycosyl hydrolase family 14) signature	397	420	IPR001554	GO:0000272\|GO:0016161
	Enph14g0310	544	PANTHER	BETA-AMYLASE 1, CHLOROPLASTIC	49	511	IPR001554	GO:0000272\|GO:0016161
	Enph14g0310	544	ProSitePatterns	Beta-amylase active site 1.	163	171	IPR018238	GO:0000272\|GO:0016161
	Enph14g0310	544	Gene3D	Glycosidases	75	540	-	-
	Enph14g0310	544	SUPERFAMILY	(Trans)glycosidases	81	513	IPR017853	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph14g0310	Enph-Chr14	5217389	5219981	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph14g0310	1	544	Glycoside Hydrolase	AT4G17090	67.514	0.0	793

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph14g0310	K01177		-	gmx:547683	880.167

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Enph14g0310	14	5217389	5219981	Enph14g0310	14	5217389	5219981	ECH