Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g1404 ATGGGACACGGACACGGAGACAAAGGCCGACCCTTCAAAAAGTTCAAGGCCGCTACAAAACTGGACGATTTTCGGAAGGGATTCATCGTCGACGACGACGTATATATGGGCGATGATGGATATGATGATGACGGTGAGAAAGATTCCAAGCCCAAAGATTTTAGCAAATTAGAGCTAAAAAAGGATCATGCAAATCGACCACTCTGGGCTTGTGGCAATGGTCGGATATTCCTCGAGACTTTCTCTCCCTTGTACAAACAAGCTTACGATTTTCTTATTGCCATAGCGGAACCCGTTTGCAGGCCAGAGTCAATGCACGAATACAATCTCACTCCTCATTCCCTATATGCTGCGGTCTCAGTTGGTCTGGAAACAGAAACGATCATATCAGTTTTGAACAAGTTATCCAAGACTATGCTTCCTAAAGAGATGATTAAATTTATACAGGATTCCACTGCAAATTATGGCAAAGTGAAACTCGTGCTCAAGAAAAATCGGTACTTCATTGAATCTCCTTTTCCAGAGGTATTGAAGACGCTGCTCAGGGATGAAGTTATATCTCGATCAAGAATCACTTCTGAGGGTACAAATGGAGATGGATTTACAATCAGCAAAACAGCAGGTGAAATTGCAGGCACTCATGATGAGTTGCTGAATGAAGCAGAAGTAGCAGCAGCTGCAGAAGAGAAAGAAACTCACTCATTTGAAATTGATCCTTCTCAGGTCAACCCTGATCTGGATATGGAACTAAAGCCTCAAGCACAACCACGGCCATATCAGGAGAAGAGTCTGAGTAAAATGTTTGGAAATGGTAGAGCAAGATCCGGTATCATAGTTCTACCTTGTGGTGCTGGTAAGTCTCTTGTTGGTGTTTCTGCTGCCTGCCGGATAAAAAAGAGCTGCCTTTGTTTGGCAACAAATGCTGTGTCTGTAGACCAGTGGGCTTTTCAGTTTAAGCTATGGTCAACCATTCGAGATGAAAATATCTGTCGTTTCACATCTGATAGCAAAGAGAGATTTCGTGGTAATGCTGGAGTGGTTGTGACCACATATAATATGGTTGCTTTTGGTGGTAAACGGTCTGAAGAATCTGAAAAGATCATTGAAGAAATAAGAAACAGAGAATGGGGATTGCTTCTCATGGATGAGGTACATGTTGTTCCTGCACATATGTTTCGGAAGGTCATTAGCCTCACTAAGTCTCACTGCAAACTTGGGCTCACAGCCACACTAGTGAGAGAGGATGAAAGGATTACAGATTTGAATTTTCTCATTGGTCCCAAGTTATATGAAGCAAATTGGTTGGATCTAGTGAAAGGTGGGTTTATTGCAAATGTACAGTGTGCTGAAGTATGGTGTCCAATGACAAAAGAATTTTTTGCGGAGTATCTGAAGAAAGAGAACTCCAAGAAGAGGCAGGCACTTTATGTGATGAATCCAAATAAGTTCAGAGCATGTGAGTTTCTCATAAAATACCATGAAACACAGCGTGGTGATAAAATTATAGTCTTTGCTGATAATCTTTTTGCTCTCACTGAGTATGCCATGAAGCTTCGCAAACCGATGATATATGGTGCTACAAGCCATGTTGAGAGGACTAAAATTCTACAAGCATTCAAAACTAGCAAAGATGTCAACACTATATTCCTATCCAAGGTGGGTGATAATTCTATTGACATTCCTGAAGCAAATGTGATAATTCAAATTTCTTCACATGCGGGTTCAAGGCGTCAAGAAGCCCAACGTCTGGGTCGTATTCTTAGGGCAAAGGGTAAGCTTCAGGATAGGATGGCAGGTGGTAAGGAGGAGTATAATGCATTTTTTTATTCTCTTGTATCAACAGATACACAGGAGATGTACTACTCTACCAAGAGGCAGCAATTTTTAATTGATCAGGGCTATAGCTTTAAGGTAATTACAAGCTTGCCTCCAGATGGAGAAGAAGCTACGTTGAATTACTATCATCTTGAAGATCAGTTGGCACTTCTTGGAAAGGTGCTGAGTGCTGGTGATGATGCAGTCGGTCTAGAGCAATTAGAAGAAGATACAGATGAAGTAGCTCTTCACAATGCCCGTCGTTCAACAGGATCAATGAGTGCCATGTCAGGTGCAAAGGGAATGGTTTACATGGAGTACAGCACTGGGAAAAACAAAGGTCAAGGGCAGATCAAGAGCAAGCCAAAAGATCCATCTAAGCGGCACTTCCTATTTAAACGACGCTATGGTGCACAATAG 2235 0.4197 MGHGHGDKGRPFKKFKAATKLDDFRKGFIVDDDVYMGDDGYDDDGEKDSKPKDFSKLELKKDHANRPLWACGNGRIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVGLETETIISVLNKLSKTMLPKEMIKFIQDSTANYGKVKLVLKKNRYFIESPFPEVLKTLLRDEVISRSRITSEGTNGDGFTISKTAGEIAGTHDELLNEAEVAAAAEEKETHSFEIDPSQVNPDLDMELKPQAQPRPYQEKSLSKMFGNGRARSGIIVLPCGAGKSLVGVSAACRIKKSCLCLATNAVSVDQWAFQFKLWSTIRDENICRFTSDSKERFRGNAGVVVTTYNMVAFGGKRSEESEKIIEEIRNREWGLLLMDEVHVVPAHMFRKVISLTKSHCKLGLTATLVREDERITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCPMTKEFFAEYLKKENSKKRQALYVMNPNKFRACEFLIKYHETQRGDKIIVFADNLFALTEYAMKLRKPMIYGATSHVERTKILQAFKTSKDVNTIFLSKVGDNSIDIPEANVIIQISSHAGSRRQEAQRLGRILRAKGKLQDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGYSFKVITSLPPDGEEATLNYYHLEDQLALLGKVLSAGDDAVGLEQLEEDTDEVALHNARRSTGSMSAMSGAKGMVYMEYSTGKNKGQGQIKSKPKDPSKRHFLFKRRYGAQ 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g1404 744 SMART helicmild6 512 590 IPR001650 -
Enph13g1404 744 MobiDBLite consensus disorder prediction 716 744 - -
Enph13g1404 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 365 687 IPR027417 -
Enph13g1404 744 Gene3D - 246 437 IPR027417 -
Enph13g1404 744 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 484 650 IPR001650 -
Enph13g1404 744 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 267 429 IPR014001 -
Enph13g1404 744 CDD DEXHc_XPB 248 417 - -
Enph13g1404 744 CDD SF2_C_XPB 448 612 - -
Enph13g1404 744 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 232 431 IPR027417 -
Enph13g1404 744 FunFam Probable DNA repair helicase RAD25 246 437 - -
Enph13g1404 744 Pfam Helicase conserved C-terminal domain 68 191 IPR032830 -
Enph13g1404 744 Pfam Type III restriction enzyme, res subunit 255 411 IPR006935 GO:0003677|GO:0005524|GO:0016787
Enph13g1404 744 NCBIfam DNA repair helicase rad25 240 739 IPR001161 GO:0003678|GO:0006289|GO:0006367
Enph13g1404 744 Gene3D - 438 678 IPR027417 -
Enph13g1404 744 PANTHER RAD25/XP-B DNA REPAIR HELICASE 57 712 - -
Enph13g1404 744 SMART ultradead3 252 433 IPR014001 -
Enph13g1404 744 Pfam ERCC3/RAD25/XPB C-terminal helicase 437 685 IPR032438 -
Enph13g1404 744 PRINTS Xeroderma pigmentosum group B protein signature 66 86 - -
Enph13g1404 744 PRINTS Xeroderma pigmentosum group B protein signature 693 712 - -
Enph13g1404 744 PRINTS Xeroderma pigmentosum group B protein signature 479 494 - -
Enph13g1404 744 PRINTS Xeroderma pigmentosum group B protein signature 546 564 - -
Enph13g1404 744 PRINTS Xeroderma pigmentosum group B protein signature 565 590 - -
Enph13g1404 744 PRINTS Xeroderma pigmentosum group B protein signature 375 395 - -
Enph13g1404 744 PRINTS Xeroderma pigmentosum group B protein signature 499 521 - -
Enph13g1404 744 PRINTS Xeroderma pigmentosum group B protein signature 441 463 - -
Enph13g1404 744 PRINTS Xeroderma pigmentosum group B protein signature 602 625 - -
Enph13g1404 744 FunFam Putative DNA repair helicase rad25 438 680 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g1404 K10843 - gmx:100789550 1294.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph13g1404 13 19682888 19689785 Enph13g1404 13 19682888 19689785 ECH