Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g1194 ATGATGGACTCACAACAGAGCAATCTATTCGAGACCGCTTCACAACCCGATACTGGCAACGATGCTTATACTTTTCTTGAATTTAACACTCAGGGGGAGGATTTCGACTATCCCGAGTTCCGTGACTCGATTAGGTCCCCGGTGGCTTGGCCCACTCCGTCTGATTCCTTGGTTGATCCCATGGAACGTGGGGTTATAGGTGCAGCGGGTTCTGATCACCAGTCCGATGCTTCTCCTGTTTCAGCTGCTCTAGGAAGCGCTTCCAAGAGTCGGGCAACCGGGTCAGGCAGTAGCGGAAACAGCCAGATGGTCGACACCCTAGCTGCTGGAATGAGCGGGTTGAATTTCGAAGACACTGGGGATGATGACAATTATGAATTTGGTAAAGGAGATTTCACTGAACATGCTTGCCGGTATTGTGGGGTATCGAACCCTGCATGTGTCGTGAGATGTAATGTGCCTTCTTGTCGCAAATGGTTTTGTAACTCACGGGGGAACACGTCGGGTTCGCATATTGTAAATCACCTGGTTCGAGCAAAGCACAAGGAAGTCTGTCTTCACAAAGATAGTCCTTTGGGAGAAACAATTCTTGAATGCTACAACTGTGGGTGTCGTAATGTGTTTCTCCTTGGATTTATTTCTGCCAAGACAGAAAGTGTAGTTGTTCTTCTATGTCGTGAACCTTGCTTGAGTGTTAATGCGCTAAAAGATATGAACTGGGATCTCAGTCAATGGTGCCCCTTGATTGATGATAGGTGTTTCCTACAGTGGCTTGTCAAGATACCATCTGAACAAGAGCAGTTGAGGGCACGTCAGATAAGTGCTCAGCAAATTAATAAGGTGGAGGAGCTATGGAAAACAAACCCTGATGCTTCTCTTGAGGACCTTGAGAAACCTGGTGTAGATGATGAACCTCAGCCTGTAGCTTTGAAATATGAAGATGCATATCAGTATCAAAATGTTTTTGCACCACTCATTAAGCTTGAAGCTGATTATGATAAGATGATGAAAGAATCTCAAAGCAAGGACAATGTTGCAATTCGATGGGACATTGGTCTTAATAAAAAGCGCATTGCATACTTTGTATTCCCAAAGGAAGATAATGAGTTGCGTCTTGTACCTGGTGATGAATTACGATTGCGTTATTCTGGAGATGCTGCACATCCAGCATGGCAATCAGTGGGGCATGTGATTAAGCTAACTGCACAGGAGGAAGTTGCTCTTGAACTTCGTGCAAATCAGGGGGTTCCAGTTGATGTAACCCATGGTTTCAGTGTGGATTTTGTCTGGAAGAGTACAAGCTTTGATAGGATGCAAGGAGCTATGAAAACCTTTGCAGTGGATGAGACTAGTGTAAGCGGGTATATTTATCATCACTTATTGGGTCATGAAGTTGAGGTTCAAATGGTGCGTATTACGTTGCCTCGTCGCTTTGGTGCACCTGGGCTTCCAGAACTCAATGCATCTCAAGTCTTGGTTTGTGCACCTAGTAATGTGGCTGTTGATCAGCTTGCTGAAAAGATAAGTTCTACCCGGATTGAAGAACTGAGGTCAGCAAAGTTTTTCAAACTGCTAGTTGTTAGGCTTTGTGCAAAGTCAAGGGAAGCTGTGAGTTCTCCGGTTGAGCATTTAACACTTCACTATCAGGTTCGAAATCTTGACACATCTGATAAGAGTGAACTTCACAAGTTACAACAGCTGAAAGATGAACAAGGTGAACTTTCTAGTAGTGATGAGAAGAAGTACAAAGCACTAAAGCGGGCAACAGAGAGAGAGATTTCCCAGAGCGCTGATGTGATCTGCTGCACTTGTGTTGGTGCTGGAGATCCTCGGCTGGCAAATTTTAGGTTCCGTCAGGTACTTATAGATGAGTCTACTCAGGCAACAGAACCTGAATGTCTCATTCCTTTGGTGCTTGGGGTCAAGCAGGTTGTTCTTGTTGGTGATCATTGTCAGCTTGGTCCAGTCATTATGTGCAAAAAAGCAGCTCGTGCAGGCCTTGCTCAGTCACTTTTTGAACGGCTTGTTCTACTTGGTGTTAAACCAATTAGATTGCAGGTTCAATACCGTATGCATCCATCTCTCTCAGAATTTCCTTCAAATAGCTTTTATGAAGGAACTCTTCAAAATGGAGTTACTGTTAATGAAAGACAGTTATCAGGAATTGATTTTCCCTGGCCAGTTCCCAATCGCCCCATGTTTTTTTATGTTCAGATGGGACAAGAAGAGATAAGTGCTAGTGGAACATCGTATTTGAATAGAACTGAGGCTGCAAATGTTGAAAAGATTGTATCTACTTTCTTAAGAAGTGGTGTAGTCCCTAGTCAGATTGGTGTGATAACACCTTATGAGGGACAAAGAGCGTATATTGTGAATTATATGTCAAGAAATGGTGCCCTCCGGCAACAACTTTACAAGGAGATTGAGGTTGCTAGTGTTGATTCTTTTCAAGGAAGGGAGAAAGACTACATCATTCTGTCATGTGTAAGAAGTAATGAGCATCAGGGTATTGGGTTCCTGAATGATCCTCGGAGGCTCAATGTTGCTTTGACTAGAGCTAGATATGGTATTGTTATTCTTGGGAACCCCAAAGTTCTGAGCAAGCAGCCTCTGTGGAATAGCTTGTTGACACACTACAAGGAACATGAGTGCCTGGTTGAAGGGCCTTTAAATAATTTGAAGCAGAGTATGGTTCAGTTCCAGAAACCCAAGAAGATCTACAATGATAGAAGGCTTTTTTATGGTGGTGGTCCTGGAGTTGTGGCAAGTGATAATTTTGGGTCAGTTGGCTCTGGCCCAACTTCTGATCGGAAGAGCAACAGGGGTAGGGGGTCTTATATGCCTCCTGGTCCATCAAATGGAAGCCATAAGCCTGGTGTGCATCCTACAGGTTATCCCATTCCAAGAGTTCCGCTGCCACCTTTTGGTGGTCCCCAATCTCAGCCATATGCCATTCCAACTCGTGGTGGAGCTTTACATGGGCCTGTTGGGGCAGTCCCTCATGTACCACCTCCAGGAAGTCGTGGTTTTGGTGCTGGGCGAGGTAATTCTGGTGCCACAGTTGGCAACCATCTCCCACACCAGCAAGGCACACAACAGTTGCTGGGGAATCTTGGATCTACCTTCAACTTTCCAGCTCTCGAAAATCCCAACAGCCAGCCATCTGTTGGTGTTCCATTGTCTCAACCTGGGTTTGCCAATAACATGCCTGTTCAAGGAGCAAGCCAATCATTTAGAGATCAGTTTTCTGTGCCAGGAATGTCACAGGATTTCTTGGGTGACGACTTCAAAAGCCAGGGATCTCATGTACCCTACAATGTTACTGATTTCTCTACCCAGGCTTCTCAGAGTGGATATGCTGTTGATTATGTTACACAAGGAGCACAAGGTGGATTCCCTGGAAACTTTTTGAACCAAAATTCTCAAGCTGGATATTCACGTTTTGGTTCTGGAAATGATTTCATGTCTCAGGACTACATGACCCATGGATCACAAGGCCTTTTTACTCAGGTTGGCTTCAATGACCCCTTGCAAGATGATGCACCACAGAGCCAATTTGGTGTGGCCAATGCCAACCCCCTTCAATCTCAGGGCTTGATGAATTCTCTCTACTCTCAACCTTTTGCTCACTACAACACACAGCCAATGAACATGCAGGCTTCCCAGCCACAGCCTCAGGGTCAGAGCTCGCAAAATCAGAAAATACACTATAATGGTTGA 3720 0.4495 MMDSQQSNLFETASQPDTGNDAYTFLEFNTQGEDFDYPEFRDSIRSPVAWPTPSDSLVDPMERGVIGAAGSDHQSDASPVSAALGSASKSRATGSGSSGNSQMVDTLAAGMSGLNFEDTGDDDNYEFGKGDFTEHACRYCGVSNPACVVRCNVPSCRKWFCNSRGNTSGSHIVNHLVRAKHKEVCLHKDSPLGETILECYNCGCRNVFLLGFISAKTESVVVLLCREPCLSVNALKDMNWDLSQWCPLIDDRCFLQWLVKIPSEQEQLRARQISAQQINKVEELWKTNPDASLEDLEKPGVDDEPQPVALKYEDAYQYQNVFAPLIKLEADYDKMMKESQSKDNVAIRWDIGLNKKRIAYFVFPKEDNELRLVPGDELRLRYSGDAAHPAWQSVGHVIKLTAQEEVALELRANQGVPVDVTHGFSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRITLPRRFGAPGLPELNASQVLVCAPSNVAVDQLAEKISSTRIEELRSAKFFKLLVVRLCAKSREAVSSPVEHLTLHYQVRNLDTSDKSELHKLQQLKDEQGELSSSDEKKYKALKRATEREISQSADVICCTCVGAGDPRLANFRFRQVLIDESTQATEPECLIPLVLGVKQVVLVGDHCQLGPVIMCKKAARAGLAQSLFERLVLLGVKPIRLQVQYRMHPSLSEFPSNSFYEGTLQNGVTVNERQLSGIDFPWPVPNRPMFFYVQMGQEEISASGTSYLNRTEAANVEKIVSTFLRSGVVPSQIGVITPYEGQRAYIVNYMSRNGALRQQLYKEIEVASVDSFQGREKDYIILSCVRSNEHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTHYKEHECLVEGPLNNLKQSMVQFQKPKKIYNDRRLFYGGGPGVVASDNFGSVGSGPTSDRKSNRGRGSYMPPGPSNGSHKPGVHPTGYPIPRVPLPPFGGPQSQPYAIPTRGGALHGPVGAVPHVPPPGSRGFGAGRGNSGATVGNHLPHQQGTQQLLGNLGSTFNFPALENPNSQPSVGVPLSQPGFANNMPVQGASQSFRDQFSVPGMSQDFLGDDFKSQGSHVPYNVTDFSTQASQSGYAVDYVTQGAQGGFPGNFLNQNSQAGYSRFGSGNDFMSQDYMTHGSQGLFTQVGFNDPLQDDAPQSQFGVANANPLQSQGLMNSLYSQPFAHYNTQPMNMQASQPQPQGQSSQNQKIHYNG 1239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g1194 1239 Gene3D - 689 901 IPR027417 -
Enph13g1194 1239 ProSiteProfiles Upf1 cysteine-histidine-rich (CH-rich) domain profile. 129 288 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
Enph13g1194 1239 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 486 886 IPR027417 -
Enph13g1194 1239 MobiDBLite consensus disorder prediction 1 20 - -
Enph13g1194 1239 MobiDBLite consensus disorder prediction 67 102 - -
Enph13g1194 1239 FunFam regulator of nonsense transcripts 1 homolog 341 429 - -
Enph13g1194 1239 FunFam Regulator of nonsense transcripts 1 690 901 - -
Enph13g1194 1239 Pfam RNA helicase (UPF2 interacting domain) 135 288 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
Enph13g1194 1239 CDD SF1_C_Upf1 691 880 IPR047187 -
Enph13g1194 1239 Pfam AAA domain 668 863 IPR041679 -
Enph13g1194 1239 CDD 1B_UPF1-like 341 428 IPR040812 -
Enph13g1194 1239 Pfam AAA domain 556 658 IPR041677 GO:0004386
Enph13g1194 1239 Gene3D - 541 594 - -
Enph13g1194 1239 MobiDBLite consensus disorder prediction 74 102 - -
Enph13g1194 1239 MobiDBLite consensus disorder prediction 924 968 - -
Enph13g1194 1239 CDD DEXXQc_UPF1 464 690 - -
Enph13g1194 1239 MobiDBLite consensus disorder prediction 927 941 - -
Enph13g1194 1239 CDD ZBD_UPF1-like 136 258 IPR018999 GO:0000184|GO:0003723|GO:0003724|GO:0005524|GO:0005737|GO:0008270
Enph13g1194 1239 Gene3D - 341 429 - -
Enph13g1194 1239 MobiDBLite consensus disorder prediction 1216 1239 - -
Enph13g1194 1239 Pfam RNA helicase UPF1, 1B domain 340 429 IPR040812 -
Enph13g1194 1239 Gene3D - 489 688 IPR027417 -
Enph13g1194 1239 PANTHER DNA2/NAM7 HELICASE FAMILY 239 934 IPR045055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g1194 Enph-Chr13 17681815 17695477 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g1194 K14326 - gmx:100795594 2277.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph13g1194 13 17681815 17695477 Enph13g1194 13 17681815 17695477 ECH