Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g1009 ATGGTATCGGAATCGGAGCTTATCGGCCGACTCCGGGAGTTTCTTCGGAGCTCCGACCTCAACACCACCACAACAGCTACGGTCCGCCGGCAGTTAGAGAAGGATTTTGGAATCGATTTATCGGACAGGAAGGCGTTCATCAGGGAACAAGTCGACTTATTCCTTCAAAGTGAGCACGAGCAACCCGAGGAACCTGAAGAACCGGAAGATGAAGAAGATCAAATCGACGAGCCTCAGCCGGAGCATGAATCAGAGGAAAGTGAAGATTCAAATGATGAAATGCAAGACCATGAAGGAGGAAGTGAAGACAAAGTAAAGCGTTCTGGGAATGGGAAGGACAAAGGACGATCTAAAAATTCAGGAAGTGAGGTACGGAAAAAAGGTGGTGGTTTTTGCAAATTGTGTAGCCTATCTCCACAGCTTCAGGAGTTCATTGGAGCCCCAGAAATGGCTAGGACTGAGGTTGTTAAGCAATTATGGATCTATATAAGGGAGAAGAATTTGCAAGACACGAATAACAGGCGGAATATTATTTGTGATGAACCATTACGTGCACTTTTTGGTGTTGATTCCATCAACATGTTTCAAATGAATAAGGCATTGTCAAAGCATATCTGGCCATTGGATTCAGATGATGTTGTCCAGGTGAAGTCTACATCAAAGGAAAAGCAGAAGAAGCAAGAGAGAGATGAAGATCCAGATGAACCAAAAAGAAAGGAGAAACGACAGAAGGGTGGAAAATCAGGGTTTCTTGCTCCTCTTCAACTGTCTGATGCCCTTGTAAACTTCCTGGGTACTGGGGAAAATGCATTGTCAAGGTCTGACGTCATCAAAAGAATGTGGGATTACATTAAAGGAAACAACCTTCAGGATCCTTCTGACAAGAGGAAAATAATTTGTGATGAGAAGCTGAAAGAACTCTTCGATGTTGACTCCTTCAATGGTTTCACGGTTACAAAACTACTGGCTCCTCATTTCATTAAGGCGGAGTAG 993 0.4381 MVSESELIGRLREFLRSSDLNTTTTATVRRQLEKDFGIDLSDRKAFIREQVDLFLQSEHEQPEEPEEPEDEEDQIDEPQPEHESEESEDSNDEMQDHEGGSEDKVKRSGNGKDKGRSKNSGSEVRKKGGGFCKLCSLSPQLQEFIGAPEMARTEVVKQLWIYIREKNLQDTNNRRNIICDEPLRALFGVDSINMFQMNKALSKHIWPLDSDDVVQVKSTSKEKQKKQERDEDPDEPKRKEKRQKGGKSGFLAPLQLSDALVNFLGTGENALSRSDVIKRMWDYIKGNNLQDPSDKRKIICDEKLKELFDVDSFNGFTVTKLLAPHFIKAE 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g1009 330 MobiDBLite consensus disorder prediction 62 96 - -
Enph13g1009 330 Pfam SWIB/MDM2 domain 134 205 IPR003121 -
Enph13g1009 330 Pfam SWIB/MDM2 domain 253 326 IPR003121 -
Enph13g1009 330 Gene3D SWIB/MDM2 domain 125 213 IPR036885 -
Enph13g1009 330 MobiDBLite consensus disorder prediction 97 123 - -
Enph13g1009 330 MobiDBLite consensus disorder prediction 56 126 - -
Enph13g1009 330 MobiDBLite consensus disorder prediction 216 246 - -
Enph13g1009 330 SUPERFAMILY SWIB/MDM2 domain 126 209 IPR036885 -
Enph13g1009 330 SUPERFAMILY DEK C-terminal domain 3 56 - -
Enph13g1009 330 ProSiteProfiles SWIB/MDM2 domain profile. 130 207 IPR003121 -
Enph13g1009 330 FunFam Upstream activation factor subunit 125 213 - -
Enph13g1009 330 Gene3D - 1 59 - -
Enph13g1009 330 MobiDBLite consensus disorder prediction 216 249 - -
Enph13g1009 330 PANTHER SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D 6 210 - -
Enph13g1009 330 SUPERFAMILY SWIB/MDM2 domain 247 328 IPR036885 -
Enph13g1009 330 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 1 56 IPR014876 -
Enph13g1009 330 Pfam DEK C terminal domain 2 55 IPR014876 -
Enph13g1009 330 CDD SWIB-MDM2_like 135 205 - -
Enph13g1009 330 Gene3D SWIB/MDM2 domain 244 330 IPR036885 -
Enph13g1009 330 ProSiteProfiles SWIB/MDM2 domain profile. 249 328 IPR003121 -
Enph13g1009 330 CDD SWIB-MDM2_like 254 326 - -
Enph13g1009 330 SMART swib_2 131 210 IPR019835 -
Enph13g1009 330 SMART swib_2 250 330 IPR019835 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g1009 Enph-Chr13 16053774 16058920 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SWI/SNF-BAF60b Enph13g1009 SWIB 1.6e-27 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g1009 K15223 - gmx:100786835 455.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph13g1009 13 16053774 16058920 Enph13g1009 13 16053774 16058920 ECH