Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph13g0944 ATGTGGCGGCGCGTTGCTCATGATCTTCGTGCATCCGCTTCCAAGAGATTGATTCCTAATCACTCTCTTCGATCTCACATTTCTAAATTTTTCTCTACCGGGGGAAGCTCCTCATATACTGTTGTGGATCATACTTATGATGCAGTCGTCGTCGGTGCCGGGGGTGCTGGGTTGAGAGCTGCTATTGGACTCTCGGAGCATGGGTTCAATACTGCTTGCATTACTAAGCTTTTCCCAACTCGTTCACATACTGTTGCAGCTCAGGGTGGTATAAATGCTGCATTGGGGAACATGACTGAGGATGACTGGAGGTGGCACATGTATGACACAGTCAAGGGAAGTGATTGGCTAGGAGATCAAGATGCCATCCAATATATGTGCAGAGAGGCACCAAAAGCTGTCATTGAGCTTGAGAATTATGGATTGCCATTTTCCCGAACTGAGGATGGAAGAATATACCAGCGTGCATTTGGTGGTCAAAGCCTGAACTTTGGAAAAGGTGGACAGGCGTACCGTTGTGCATGTGCTGCTGATCGAACTGGACATGCTTTATTGCACACTCTCTATGGCCAGGCGATGAAACATAATACACAATTTTTTGTGGAATATTTTGCGTTAGATCTTTTAATGAGTAGTGATGGTAGTTGCCAAGGAGTAGTTGCATTGAATATGGAGGATGGAACATTACATCGGTTTCAAGCTGCTTCAACAATTTTGGCCACAGGAGGTTATGGTAGAGCATACTTTTCCGCAACCTCAGCACATACATGCACAGGAGATGGTAATGCCATGGTTGCACGTGCAGGGCTCCCACTCCAGGATTTGGAGTTTGTGCAATTTCACCCAACAGGCATATATGGAGCTGGTTGCCTAATCACAGAAGGTTCTCGTGGAGAAGGTGGAATTCTTAGGAATAGTGAAGGCGAGCGCTTCATGGAACGATATGCTCCTACTGCAAAGGATCTTGCATCAAGAGATGTTGTTTCAAGATCAATGACTATGGAGATACGGGATGGTCGTGGTGTAGGACCTCTGAAAGATCACATCTATCTACACTTAAATCACTTGCCCCCAGATGTGCTTAAGGAAAGGCTTCCTGGCATCTCCGAAACTGCTGCTATATTTGCTGGTGTGGATGTTACAAAGGAACCCATTCCTGTTTTGCCAACTGTGCACTATAACATGGGTGGAATTCCCACAAACCATCATGGAGAGGTGGTTACTATTCAAGGTGACAATCCAGATGCAGTCGTACCAGGAGCAAAACAGAAGCCTTTGGAGAAGGACGCCGGTCAAAAGACAATTGCATGGATGGACAAATTGAGAAATTCAAACGGTTCATTACCAACTTCAAATATTCGATTAAATATGCAACGAATAATGCAAAACAATGCTGCTGTATTCCGTACACAAGAAACATTAGAAGAAGGTTGTCAGTTAATTGATAAAGCATGGGAGAGTTTTCATGATGTGAATTTGAAGGATCGGAGTCTGATATGGAACTCTGACTTGATTGAGACTATTGAGTTGGAAAACCTTTTGATAAATGCCTGCATCACCATGCATTCAGCTGAAGCAAGGAAAGAAAGTAGAGGAGCACATGCCCGTGAGGACTTTACGAAAAGAGATGATGAGAATTGGATGAAGCACTCGTTAGGATATTGGGAGAATGAGAAGGTGCGCTTAGATTACAGGCCGGTGCACATGAATACATTGGATGATGAGGTTGAATCATTCCCTCCCAAAGCTCGTGTTTATTAA 1761 0.4435 MWRRVAHDLRASASKRLIPNHSLRSHISKFFSTGGSSSYTVVDHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDAIQYMCREAPKAVIELENYGLPFSRTEDGRIYQRAFGGQSLNFGKGGQAYRCACAADRTGHALLHTLYGQAMKHNTQFFVEYFALDLLMSSDGSCQGVVALNMEDGTLHRFQAASTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHPTGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIRDGRGVGPLKDHIYLHLNHLPPDVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNHHGEVVTIQGDNPDAVVPGAKQKPLEKDAGQKTIAWMDKLRNSNGSLPTSNIRLNMQRIMQNNAAVFRTQETLEEGCQLIDKAWESFHDVNLKDRSLIWNSDLIETIELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHSLGYWENEKVRLDYRPVHMNTLDDEVESFPPKARVY 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph13g0944 586 Gene3D - 47 411 IPR036188 -
Enph13g0944 586 PIRSF SDHA_APRA_LASPO 36 371 - -
Enph13g0944 586 PIRSF SDHA_APRA_LASPO 404 575 - -
Enph13g0944 586 FunFam Succinate dehydrogenase flavoprotein subunit (SdhA) 425 541 - -
Enph13g0944 586 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein C-terminal domain 445 586 IPR037099 GO:0016491
Enph13g0944 586 PANTHER SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT 35 420 IPR030664 -
Enph13g0944 586 ProSitePatterns Fumarate reductase / succinate dehydrogenase FAD-binding site. 81 90 IPR003952 GO:0016491
Enph13g0944 586 FunFam Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial 538 586 - -
Enph13g0944 586 Gene3D succinate dehydrogenase protein domain 537 586 - -
Enph13g0944 586 Gene3D - 426 536 - -
Enph13g0944 586 Gene3D Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 285 388 IPR027477 -
Enph13g0944 586 FunFam Mitochondrial succinate dehydrogenase flavoprotein subunit 285 388 - -
Enph13g0944 586 Pfam FAD binding domain 47 408 IPR003953 -
Enph13g0944 586 SUPERFAMILY Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain 275 393 IPR027477 -
Enph13g0944 586 SUPERFAMILY FAD/NAD(P)-binding domain 38 408 IPR036188 -
Enph13g0944 586 Pfam Fumarate reductase flavoprotein C-term 455 586 IPR015939 GO:0016491
Enph13g0944 586 FunFam Succinate dehydrogenase complex, subunit A, flavoprotein (Fp) 35 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph13g0944 Enph-Chr13 15479808 15488132 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph13g0944 K00234 - qsa:O6P43_033717 1093.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph13g0944 13 15479808 15488132 Enph13g0944 13 15479808 15488132 ECH