LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph12g1007	ATGTCTCGGATATTCTCGAGATGGAAGAAGGTGAAAGAGATGGCGATGATTTCTTCTGCAGAGACTCAGTTCGCTGTCGCTGCAAGAACTGGTCATAACTGGACGAGGTTGAATGTTCGATTCAACCAGGTTTGCCCAATCTCGACTCACTTGAATTATTTTCCCATCGCCACTCATAGACGACGGGAATCGTTCATCACCGTTCAGGAGCGGTACAAGTGGGACCACGGCGGCTCCGGCGATACCTGCAACCGGAATTCTCAGGCCCGAAAGATTCGAGCGGATGCTAATTGCCCACGGTGCGCCCGGAACATGGATGTATTCTTCTCCAATCGCCATTTCCCCACTTCTGCTTCTGCTTCCAATTTGATTCCTCCGGTTCTTGTTCATGAAGAAGGAGGTTATCAAACTATGAATCTCTGCCCCAATTGTAAAACAGCTTATTTCTTCCGCCCTTTTGAAACTGCTCCTCTCCAAGGTACATTTGTGGAGATTGGCAGGGTCATAGATAACAAAGTTAATAATACCAGTAATAAATTACAGAAGAGGATATCCCATGGCAAAGTGAAAGATGACAGAGAGAGTGATAATAGTAATGGCAGTAACAGTGTAGCAGAAGATTATGCCCATAGAAATAACTGCAATAATGGGCTTAGAGTGACATTCTGGGATACCTTGAGATCCTATAGTGATGGAGAGGGTGGAGAACCACCAGAAACTTGGTCTCCCCCACCTGGCTCTTCTAACGGGAATGGGATTGCTGTGCATACTCCTCCAGGCCCACCTTTTGCGCCTGGTATTAACGTTGTTCGGGCTTCAGGGCCACGGGAGGGTGGTTCAGGTGGTGGAGGTGAGGGTAATGGAGAAAAGACAACATGGGGAGGCTCCAATTTGGGCAAGGATTTACCCACACCAAAGGAGATCTGCAACGGTCTTGATAAGTTTGTTATTGGCCAGGACAGAGCCAAAAAGGTGCTTTCTGTAGCTGTGTATAATCACTATAAAAGAATACACCATGCTTCTTTACTGAAAGGGTCAGGGGCAGATTCAGGAAATTCAAAAGCTCTAGATGATGATGATAATGTGGAGCTAGAAAAGAGTAATGTTCTCTTGATGGGTCCTACAGGTTCAGGGAAGACATTGCTGGCAAAAACTCTAGCTCGATTTGTGAACGTTCCATTTGTCATTGCTGATGCAACAACCTTAACACAGGCAAGCGGGTTATGTTGGAGAAGATGTCGAATCAATATTGCAGCTGAGTTCAATGTTCAAGCTGCTCAACAAGGAATAGTTTACATTGACGAAGTTGACAAGATAACTAAGAAGGCTGAAAGCTTAAATATTAGTCGGGATGTCTCCGGTGAGGGTGTTCAACAGGCACTACTGAAAATGTTGGAAGGAACTATAGTAAATGTTCCTGAGAAAGGTGCGAGGAAGCATCCACGGGGTGATAACATACAGATTGACACAAAGGATATTCTATTTATATGTGGTGGAGCATTCATTGATCTTGACAAAACAATATCAGAGAGACGACAAGATTCTTCTATTGGTTTTGGAGCTCCAGTTCGTGCAAATATGAGAACCAATAGAGCAATAAATGTTGCAGTAACATCAGCATTACTTGAGTCGGTGGAAAGTTCTGATCTTATTGCTTATGGTCTCATACCTGAGTTTATTGGACGGTTTCCAATCTTAGTTAGTTTATCTGCCTTAACAGAAGATCAACTTGTGCAGGTCCTCACAGAGCCAAAAAATGCTCTTGGTAAGCAGTACAAGAAATTAATTGGAATGAATAACGTTAAGCTTCATTTCACAGAAAAAGCACTGAGATTAATTGCACAGAAAGCAATGGCCAAGAACACTGGTGCCAGGGGTTTAAGAGCCATACTGGAAAGCATCCTAACTGATGCCATGTTTGAGATTCCAGATGCTAAGTCTGGGAATGACCGGATTGATGCAGTTGTTGTTGATGAGGAGTCAGTAGGATCAGTAGATGCCCCTGGATGTGGAGGTAAAATTCTTCACGGTCGTGGTGCTTTGGAGTCTTACCTTGCAAAGATGAAGGATTCACTGGTCGAGGGTGAGGTACCTGGAACAGATGTACAAGAGGGGGATTCAGAGCTTTCATCAAGAGCTATGAGTATGTGA	2151	0.4421	MSRIFSRWKKVKEMAMISSAETQFAVAARTGHNWTRLNVRFNQVCPISTHLNYFPIATHRRRESFITVQERYKWDHGGSGDTCNRNSQARKIRADANCPRCARNMDVFFSNRHFPTSASASNLIPPVLVHEEGGYQTMNLCPNCKTAYFFRPFETAPLQGTFVEIGRVIDNKVNNTSNKLQKRISHGKVKDDRESDNSNGSNSVAEDYAHRNNCNNGLRVTFWDTLRSYSDGEGGEPPETWSPPPGSSNGNGIAVHTPPGPPFAPGINVVRASGPREGGSGGGGEGNGEKTTWGGSNLGKDLPTPKEICNGLDKFVIGQDRAKKVLSVAVYNHYKRIHHASLLKGSGADSGNSKALDDDDNVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQASGLCWRRCRINIAAEFNVQAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGDNIQIDTKDILFICGGAFIDLDKTISERRQDSSIGFGAPVRANMRTNRAINVAVTSALLESVESSDLIAYGLIPEFIGRFPILVSLSALTEDQLVQVLTEPKNALGKQYKKLIGMNNVKLHFTEKALRLIAQKAMAKNTGARGLRAILESILTDAMFEIPDAKSGNDRIDAVVVDEESVGSVDAPGCGGKILHGRGALESYLAKMKDSLVEGEVPGTDVQEGDSELSSRAMSM	716

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph12g1007	716	NCBIfam	ATP-dependent protease ATP-binding subunit ClpX	299	664	IPR004487	GO:0005524\|GO:0006457\|GO:0051082\|GO:0140662
	Enph12g1007	716	MobiDBLite	consensus disorder prediction	229	299	-	-
	Enph12g1007	716	MobiDBLite	consensus disorder prediction	696	716	-	-
	Enph12g1007	716	Pfam	C-terminal, D2-small domain, of ClpB protein	572	642	IPR019489	-
	Enph12g1007	716	Gene3D	-	571	671	-	-
	Enph12g1007	716	MobiDBLite	consensus disorder prediction	179	209	-	-
	Enph12g1007	716	PANTHER	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPX-LIKE, MITOCHONDRIAL-RELATED	94	689	-	-
	Enph12g1007	716	CDD	RecA-like_ClpX	303	569	-	-
	Enph12g1007	716	Gene3D	-	296	570	IPR027417	-
	Enph12g1007	716	FunFam	CLP protease regulatory subunit CLPX3 mitochondrial	296	570	-	-
	Enph12g1007	716	SMART	AAA_5	365	523	IPR003593	GO:0016887
	Enph12g1007	716	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	301	658	IPR027417	-
	Enph12g1007	716	SMART	ClpB_D2_small_2	572	665	IPR019489	-
	Enph12g1007	716	FunFam	ATP-dependent Clp protease ATP-binding subunit ClpX	571	674	-	-
	Enph12g1007	716	Pfam	AAA domain (Cdc48 subfamily)	365	565	IPR003959	GO:0005524\|GO:0016887

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph12g1007	Enph-Chr12	16590513	16600295	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph12g1007	K03544		-	qsa:O6P43_005462	1017.68

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Enph12g1007	12	16590513	16600295	Enph12g1007	12	16590513	16600295	ECH