LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph12g0596	ATGGGGAGCTTGGGCGCGATTTTGAGACATCCTGATGACTTCTACCCGCTTGTGAAGCTTAAAATGGCCGTCAGGCATGCAGAGAAGCAGATCCCTCCAGAGCCACACTGGGGCTTCTGCTACAGCATGCTTCACAAGGTGTCTCGAAGTTTTGCTCTCGTCATCCAGCAGCTCGGAACCGAGCTTCGTAACGCTGTTTGTATATTTTATTTGGTTCTTCGAGCCCTTGATACTGTTGAGGATGATACTAGCATAGCTACAGATGTCAAGGTGCCAATATTAATAACTTTTCATCGTCATATATATGATCGTGATTGGCATTTTTCTTGTGGCATAAAGGAGTACAAAGTCCTAATGGACCAGTTTCATTATGTTTCGACTGCATTTCTGGAACTTGGAAAGAACTATCAGGAAGCAATTGAGGATATCACTAAAAGGATGGGAGCTGGAATGGCCAAATTTATTTGCAAGGAGGTAGAGACAGTTGATGACTATGATGAATATTGTCACTATGTAGCAGGACTTGTTGGGATAGGTTTATCCAAGCTTTTCCATGCCTCTGGTTCAGAAGATTTGGCTCCAGACTACCTCTCTAATTCAATGGGTTTGTTCCTTCAGAAAACAAATATTATCCGAGATTACCTGGAAGACATTAATGAGATCCCAAAGTCACGCATGTTTTGGCCTAGGCAGATCTGGAGTAAATATGTGAACAGACTTGAGGACTTGAAAGATGAAGACAACTCTGTCAAGGCTGTGCAATGCCTCAATGACATGGTCACCAATGCGTTGATGCATTTTGAAGATTGCCTGAAATACATGTCTAACTTAAGAGACTTGGCTATATTTCGTTTTTGTGCTATTCCTCAGATCATGGCCATTGGGACTCTTGCCTTATGCTACAACAACAACGAGGTCTTCAGAGGTGTAGTTAAAATGAGGCGTGGCCTGACTGCCAAGGTGATTGATCAGACAAAGACAATGGCAGATGTCTATGGTGCTTTCTTTGATTTTTCTTGTATGTGGAATCCAAGATATTCTTGTGGTCACATTTATTCTGTAGCACATTCTTCCATGGCTCCTAAGCTATTTTTTAGTTTCAGTCACATATTATTGAGTAGCTACCTTTTTCCAGCTGAACAATCCTCTATTGTACTATTGCAGGTTGACAAAAACGATCCCAATGCAACAAAAACATTGAGCAGGGTGGAAGCCATACAGAAAACTTGCAGACATTCTGGTCTGCTAAGTAAAAAGCAAGCACATCATATCCATATAGCTTCTAAATTTTTGATACTTATTGTCACACTGGCTATCATTTTCGCTTATCTCTCTGCCAACAGGGATAACAACTGA	1356	0.4137	MGSLGAILRHPDDFYPLVKLKMAVRHAEKQIPPEPHWGFCYSMLHKVSRSFALVIQQLGTELRNAVCIFYLVLRALDTVEDDTSIATDVKVPILITFHRHIYDRDWHFSCGIKEYKVLMDQFHYVSTAFLELGKNYQEAIEDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGIGLSKLFHASGSEDLAPDYLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNRLEDLKDEDNSVKAVQCLNDMVTNALMHFEDCLKYMSNLRDLAIFRFCAIPQIMAIGTLALCYNNNEVFRGVVKMRRGLTAKVIDQTKTMADVYGAFFDFSCMWNPRYSCGHIYSVAHSSMAPKLFFSFSHILLSSYLFPAEQSSIVLLQVDKNDPNATKTLSRVEAIQKTCRHSGLLSKKQAHHIHIASKFLILIVTLAIIFAYLSANRDNN	451

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph12g0596	451	FunFam	Squalene synthase 1	34	348	-	-
	Enph12g0596	451	SFLD	Squalene/Phytoene Synthase Like	37	325	IPR002060	GO:0009058
	Enph12g0596	451	ProSitePatterns	Squalene and phytoene synthases signature 2.	201	229	IPR019845	GO:0016765
	Enph12g0596	451	CDD	Trans_IPPS_HH	38	320	IPR033904	GO:0004311
	Enph12g0596	451	PANTHER	FARNESYL-DIPHOSPHATE FARNESYLTRANSFERASE	1	343	IPR044844	GO:0004311
	Enph12g0596	451	Pfam	Squalene/phytoene synthase	45	315	IPR002060	GO:0009058
	Enph12g0596	451	ProSitePatterns	Squalene and phytoene synthases signature 1.	168	183	IPR019845	GO:0016765
	Enph12g0596	451	Gene3D	Farnesyl Diphosphate Synthase	34	357	IPR008949	-
	Enph12g0596	451	NCBIfam	squalene synthase	36	343	IPR006449	GO:0004310\|GO:0008610
	Enph12g0596	451	SFLD	Isoprenoid Synthase Type I	37	325	-	-
	Enph12g0596	451	SUPERFAMILY	Terpenoid synthases	37	349	IPR008949	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph12g0596	K00801		-	gmx:547940	707.597

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Enph12g0596	12	12451615	12460101	Enph12g0596	12	12451615	12460101	ECH