Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g0548 ATGGCTCAGCCGCTTGTGAAGAAGGACGACGACCGGGACGATGAAGCCGAGTACTCTCCCTTTCTGGGAATCGAAAAGGGTGCTGTTCTTCAGGAAGCCAGGGTTTTTAATGACCCACAACTTGATGCCAGGAGATGTTCACAGGTTATCACAAAACTTTTATACCTATTGAATCAGGGAGAGACATTTACTAAGATTGAAGCTACAGAAGTTTTCTTTGCTGTGACTAAGCTTTTCCAGTCTAGAGATATTGGGTTGAGGAGGATGGTCTACCTGATGATAAAGGAGCTTTCTCCCTCAGCAGATGAGGTTATAATTGTGACAAGCTCTCTCATGAAGGACATGAATAGTAAGACTGATATGTACAGGGCAAATGCTATTCGTGTACTTTGCCGTATTACAGATGGAACCCTCCTTACCCAAATTGAGAGGTATTTGAAACAAGCAATTGTAGATAAGAATCCAGTAGTTGCAAGTGCAGCCCTAGTTAGTGGCATTCATCTACTCCAGACAAATCCTGAGATTGTGAAGAGGTGGAGCAATGAGGTTCAAGAAGCTGTTCAATCAAGAGCAGCTCTTGTGCAATTTCATGCACTTGCTTTGCTACATCAGATAAGGCAGAATGATCGCCTAGCTGTTAGCAAGTTGGTTACCAGCTTGACAAGGGGAACTGTTCGCTCACCTTTGGCCCAATGCCTTTTGATCCGTTATACTAGTCAGGTTATTCGTGAGTCCAGCAATAATACACAGACAGGAGATCGTCCATTTTATGATTTTCTTGAGAGTTGCCTTCGTCACAAATCAGAGATGGTGATTTTTGAAGCAGCCAGAGCAATTACTGAGCTCAATGGTGTAACAAACCGGGAATTAACCCCAGCCATTACTGTTCTTCAGCTCTTCTTAAGTTCTTCTAAGCCAGTCTTGAGATTTGCTGCTGTTCGCACATTGAACAAGGTGGCAATGACACATCCCATGGCTGTCTCAAACTGCAACATTGATATGGAAAGTTTAATCTCTGACCAAAACAGAAGCATCGCCACACTTGCAATTACCACGCTTTTGAAGACAGGAAATGAATCCAGTGTGGACCGTCTTATGAAGCAGATTACAAATTTTATGTCAGATATCGCTGATGAGTTCAAAATTGTTGTTGTTGATGCCATAAGATCATTGTGTTTAAAGTTTCCCTTGAAATATCGATCTCTGATGAATTTCCTTAGCAACATTCTCCGGGAAGAAGGTGGATTTGAGTACAAGAAGGCAATTGTAGATTCAATTGTGATTCTCATAAGAGATATTCCAGATGCAAAGGAGAGTGGGTTGCTTCATCTCTGTGAGTTCATTGAAGATTGTGAATTCACCTATTTGTCCACACAGATACTGCACTTCCTGGGGATTGAAGGACCAAAAACATCAGACCCCAGCAAATATATACGTTACATATATAATAGAGTACATCTTGAAAACGCAACTGTCAGGGCTTGTGCTGTGAGCACTTTGGCAAAGTTTGGTGCTTCAGTCGAAGCATTGAAGCCCCGGATCTTTGTCTTGCTAAGGCGATGTCTTTTTGACAGTGATGATGAGGAGCCTTCAGAAGAACCTTTTGACATCAACTCTGTGCCTAGGGAGGTTAAGTCCCAGCCACTTGCAGAGAAAAAAGCACCAGGCAAAAAGCCAACTGGTTTGGCTGCTCCTCCAAGTGGTCCCCCATCAACTGCAGATGCATATGAAAGACTGCTGTCCTCCATTCCCGAGTTTGCAAGCTTTGGGAAGCTTTTCAAGTCCTCACCACCTGTGGAACTTACTGAAGCAGAGACAGAATATGCAGTCAATGTTGTTAAGCACATTTTTGATAGGCATGTTGTGTTCCAGTACAACTGCACAAACACCATACTGGAGCAATTACTTGAAGATGTTACTGTAATTGTAGATGCCTCAGATGCTGAGGAATTTTCTGAGGTTTTCTCCAAGCCTCTCAGATCTCTTCCTTATGACTCACCCAGGCAGACATTTGTGGCTTTTGAGAAGCCAGAAGGATTGCCCACCGTTGGAAAATTTTCCAATATTCTGAAATTTATTGTTAAAGAGGTTGACCCATCCACTGGTGAGGCAGAAGATGATGGTGTTGAAGATGAATACCAGCTGGAGGACTTGGATGTTGTTGCAGCTGATTACATGTTGAAAGTGGGGGTGCCTAATTTTAGAAATGCATGGGACAACATGGTTCCTGATGCTGAGCGAGTGGATGAATATGGGCTTGGCCCAAGAGAGAGCTTGGGTGAAGCTGTAAATACTGTTATCAATCTTCTTGGGATGCAGCCCTGTGAGGGCACAGAGAACGTCCCACCCAATTCAAGGTCACACACATGTCTATTGTCTGGTGTATTTATAGGGAATATAAAGGTGCTTGTGCGCTTGTCCTTTGGACTTGATGGTCCAAAGGATGTTGCAATGAAACTGGCTGTTAGATCTGAGGATGAATCTGTCAGTGACACCATTCATGAGATTGTGGCAAACGGCTAG 2523 0.4336 MAQPLVKKDDDRDDEAEYSPFLGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQGETFTKIEATEVFFAVTKLFQSRDIGLRRMVYLMIKELSPSADEVIIVTSSLMKDMNSKTDMYRANAIRVLCRITDGTLLTQIERYLKQAIVDKNPVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALALLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTSQVIRESSNNTQTGDRPFYDFLESCLRHKSEMVIFEAARAITELNGVTNRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPMAVSNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVDAIRSLCLKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIRDIPDAKESGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTSDPSKYIRYIYNRVHLENATVRACAVSTLAKFGASVEALKPRIFVLLRRCLFDSDDEEPSEEPFDINSVPREVKSQPLAEKKAPGKKPTGLAAPPSGPPSTADAYERLLSSIPEFASFGKLFKSSPPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTILEQLLEDVTVIVDASDAEEFSEVFSKPLRSLPYDSPRQTFVAFEKPEGLPTVGKFSNILKFIVKEVDPSTGEAEDDGVEDEYQLEDLDVVAADYMLKVGVPNFRNAWDNMVPDAERVDEYGLGPRESLGEAVNTVINLLGMQPCEGTENVPPNSRSHTCLLSGVFIGNIKVLVRLSFGLDGPKDVAMKLAVRSEDESVSDTIHEIVANG 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g0548 840 Gene3D Coatomer, gamma subunit, appendage domain 570 721 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Enph12g0548 840 SUPERFAMILY Clathrin adaptor appendage domain 570 724 IPR013041 -
Enph12g0548 840 SUPERFAMILY ARM repeat 29 527 IPR016024 -
Enph12g0548 840 FunFam Coatomer subunit gamma 333 540 - -
Enph12g0548 840 Gene3D - 722 838 IPR012295 -
Enph12g0548 840 FunFam Coatomer subunit gamma 568 721 - -
Enph12g0548 840 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 725 837 IPR009028 GO:0006886|GO:0016192|GO:0030117
Enph12g0548 840 FunFam Coatomer subunit gamma 722 838 - -
Enph12g0548 840 Pfam Adaptin N terminal region 29 528 IPR002553 GO:0006886|GO:0016192|GO:0030117
Enph12g0548 840 PANTHER COATOMER SUBUNIT GAMMA 529 838 IPR017106 -
Enph12g0548 840 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 723 837 IPR032154 -
Enph12g0548 840 Gene3D - 23 316 IPR011989 -
Enph12g0548 840 FunFam Coatomer subunit gamma 23 316 - -
Enph12g0548 840 MobiDBLite consensus disorder prediction 546 573 - -
Enph12g0548 840 PIRSF Gamma-COP 7 529 IPR017106 -
Enph12g0548 840 PIRSF Gamma-COP 528 838 IPR017106 -
Enph12g0548 840 Pfam Coatomer gamma subunit appendage platform subdomain 575 720 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g0548 Enph-Chr12 12025247 12035447 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g0548 K17267 - gmx:100789362 1517.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph12g0548 12 12025247 12035447 Enph12g0548 12 12025247 12035447 ECH