Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Enph12g0225 ATGGCTTCCTCCGTGCTTTCCTCCGCCTCTGTCACCACCGTCAGCCGCTCGGCACAGGCCAACATGGTTGCACCCTTCACCGGACTCAAGTCAGCCGTCGGCTTCCCTGTCACAAGGAAGACCAACACCGACATAACCTCCATTGCCGACAACGGTGGGAGAGTACACTGCATGAAGGTGTGGCCCACAGTTGGACTGAAGAAGTACGAGACTCTCTCATACCTCCCACCTCTCTCTCCTGAATCTTTGGCTAAGGAAGTTGATTACCTTCTCAGAAAGGGATGGATTCCTTGCTTGGAATTCGAGAAAGGCAACGCATTTGTGCACCGTGAGAACAACAAGTCACCAGGGTACTACGATGGAAGGTACTGGACAATGTGGAAGCTACCAATGTTTGGATGCACAGACTCAGTTCAGGTGTTGCAGGAGCTTGAGGAGGTCAAGAAGGAGCACCCTGACTCTCACGTCAGAATCATCGGTTTCGACAACCGTCGCCAAGTCCAGTGCATCAGCTTCATCGCCTACAAGCCCCCAGGCTACAACTAA 546 0.5293 MASSVLSSASVTTVSRSAQANMVAPFTGLKSAVGFPVTRKTNTDITSIADNGGRVHCMKVWPTVGLKKYETLSYLPPLSPESLAKEVDYLLRKGWIPCLEFEKGNAFVHRENNKSPGYYDGRYWTMWKLPMFGCTDSVQVLQELEEVKKEHPDSHVRIIGFDNRRQVQCISFIAYKPPGYN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Enph12g0225 181 Hamap Ribulose bisphosphate carboxylase small subunit [cbbS]. 67 178 IPR000894 -
Enph12g0225 181 Gene3D Ribulose bisphosphate carboxylase, small subunit 58 181 IPR036385 -
Enph12g0225 181 SMART RuBisCO_small_2_a 68 177 IPR000894 -
Enph12g0225 181 Pfam Ribulose bisphosphate carboxylase, small chain 69 177 IPR000894 -
Enph12g0225 181 FunFam Ribulose bisphosphate carboxylase small chain, chloroplastic 58 181 - -
Enph12g0225 181 Pfam Ribulose-1,5-bisphosphate carboxylase small subunit 2 44 IPR024680 -
Enph12g0225 181 CDD RuBisCO_small 67 177 IPR000894 -
Enph12g0225 181 PRINTS RuBisCO small subunit signature 46 64 IPR024681 -
Enph12g0225 181 PRINTS RuBisCO small subunit signature 67 93 IPR024681 -
Enph12g0225 181 PRINTS RuBisCO small subunit signature 19 36 IPR024681 -
Enph12g0225 181 PRINTS RuBisCO small subunit signature 151 177 IPR024681 -
Enph12g0225 181 PRINTS RuBisCO small subunit signature 117 146 IPR024681 -
Enph12g0225 181 PRINTS RuBisCO small subunit signature 95 110 IPR024681 -
Enph12g0225 181 PANTHER RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1, CHLOROPLASTIC 1 178 IPR024681 -
Enph12g0225 181 SUPERFAMILY RuBisCO, small subunit 58 179 IPR036385 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Enph12g0225 Enph-Chr12 8592056 8594166 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Enph12g0225 K01602 - cpap:110826094 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Enph12g0225 12 8592056 8594166 Enph12g0225 12 8592056 8594166 ECH