LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Enph10g0288	ATGACAGCACTCCTGATTGACAGATACGGTTGGAGCAGGATCAAGAAGCCTACGCTACACACGATTGCACCTGATAATTCCTCGTCTTCTTCCACACAGGTGTTGGCCTCAGAGAGCTCTCTGCTTATTACCGTCAATAATGCGTGGAAAACGGTTTCTCAACTCTTCGCTTTTTCATTTCCTCCTTTTCTTCCTGTGACGAAGTTGAAACTGACGTCGCTCTATAGCATTCTGCTGATTTTAGCCATTGGCGCCACCTGTCTCATTCACATCGTTTTCTCTTCGTCGTCTTTTGCGCACGCTTTTTGCACTCAATCGTATCGCTTTCTTTCGATCCCCGCATTTAAAGCGTCATTCCGAGTCTCCACCAGGGAGGAAGTTTCTATGATCATTAGGAGAAGTTTCCCCATTCTGTATGTCTTAACTATTTTGAACAACAATGGTGAGTTTCAGTTCTTATACGTCCGTTCACTGAATGGAAAACCTTCTTGGCGGCTCTCTTTGCGGCATGTTTTAGTGGCTTCAATTTCTTCATTTTTATATGGCTACCATCTTGGAGTAGTCAATGAAACCTTAGAGAGCATTTCTGTAGACCTTGGCTTCAGAGGGAATACCATTGCTGAAGGTCTGGTAGTTAGTACATCTTTGGGTGGTGCTTTTGTTGGATCTCTGTTCAGTGGGTGGATTGCAGATGGGGTTGGACGTAGAAGAGCATTCCAGTTGTGTGCTTTGCCTATGATCATTGGGGCATCGATGAGTGCGACAACAAAAAGCGTATGGGGTATGCTTTTGGGAAGGTTATTTGTTGGCACTGGAATGGGACTTGGCCCACCTGTTGTAGCTCTTTATGTGGCTGAGGTGTCGCCTGCAGCTGTAAGGGGTGCTTTCGGTAGTGTAACTCAAATAGCAACATGTTTTGGACTTATGGGCGCTCTATTTATTGGGATCCCAGCCAAAGAATTAGTGGGTTGGTGGCGGATTTGTTTCTGGGTTTCTGCTATTCCTGCTGCAATACTAGCCTTTTTCATGGAGTTCTGTGCAGAGAGTCCTCATTGGCTTTATAAGAGTGGAAGAGGCAATGAGGCTGAAGCTGAATTTGAGAAGCTCTTGGGAGGGATACATGTGAAACCTGCGATGACTGAACTGTTGAGGTCTGACAGAGCTGATGAGACTGATAAGGTGAAACTCTCGGAATTACTTTATGGACGGCATTTCAAAGTGATGTTCATTGGATCTACGCTTTTTGCTTTACAGCAACTATCTGGAATAAATGCTGTTTTTTATTTCTCATCGACTGTCTTTAAAAACTTTGGTGTTCCATCAGATCTTGCAAACACATGTGTAGGGATTTGCAATTTGCTGGGGTCCATTCTTGCATTGATACTGATGGATAAACTTGGAAGAAAAGTGCTTCTGCTGGGGAGCTTTTTGGGCATGGCAGTGTCAATGGGTCTCCAAGTCATTGCTGCAACAAGTTCTTTGGCATCGGGATCTGGAACAATGTATCTATCTGTTGGTGGCATGTTGATGTTTGTCTTCACATTTGCGTTAGGTGCTGGTCCAGTACCTAGTCTTCTCCTATCAGAAATACTACCTAGCAGGATCAGGGCAAAGGCATTGGCAATTTGCTTGGCTGTCCATTGGGTGATCAATTTCTTTGTCGGTCTGTTATTTTTGCGCTTGCTGGAGCAAATCGGAGCACAAGTGCTGTATACTATTTTTGGGTGCCTTCTGTCTGGTGGCAGTGATGTTTGTGAAGAGGAATCTTCTACCCCATGCATCTGTCATCTTGGAAGTTTCTCAATGCTTGACGTTATGCTATTAATAGCTCGCTAA	1836	0.4444	MTALLIDRYGWSRIKKPTLHTIAPDNSSSSSTQVLASESSLLITVNNAWKTVSQLFAFSFPPFLPVTKLKLTSLYSILLILAIGATCLIHIVFSSSSFAHAFCTQSYRFLSIPAFKASFRVSTREEVSMIIRRSFPILYVLTILNNNGEFQFLYVRSLNGKPSWRLSLRHVLVASISSFLYGYHLGVVNETLESISVDLGFRGNTIAEGLVVSTSLGGAFVGSLFSGWIADGVGRRRAFQLCALPMIIGASMSATTKSVWGMLLGRLFVGTGMGLGPPVVALYVAEVSPAAVRGAFGSVTQIATCFGLMGALFIGIPAKELVGWWRICFWVSAIPAAILAFFMEFCAESPHWLYKSGRGNEAEAEFEKLLGGIHVKPAMTELLRSDRADETDKVKLSELLYGRHFKVMFIGSTLFALQQLSGINAVFYFSSTVFKNFGVPSDLANTCVGICNLLGSILALILMDKLGRKVLLLGSFLGMAVSMGLQVIAATSSLASGSGTMYLSVGGMLMFVFTFALGAGPVPSLLLSEILPSRIRAKALAICLAVHWVINFFVGLLFLRLLEQIGAQVLYTIFGCLLSGGSDVCEEESSTPCICHLGSFSMLDVMLLIAR	611

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Enph10g0288	611	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	170	611	IPR020846	GO:0022857
	Enph10g0288	611	NCBIfam	sugar porter family MFS transporter	170	578	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Enph10g0288	611	SUPERFAMILY	MFS general substrate transporter	161	578	IPR036259	-
	Enph10g0288	611	ProSitePatterns	Sugar transport proteins signature 1.	459	475	IPR005829	GO:0016020\|GO:0022857\|GO:0055085
	Enph10g0288	611	ProSitePatterns	Sugar transport proteins signature 1.	226	243	IPR005829	GO:0016020\|GO:0022857\|GO:0055085
	Enph10g0288	611	PRINTS	Sugar transporter signature	178	188	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Enph10g0288	611	PRINTS	Sugar transporter signature	263	282	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Enph10g0288	611	PRINTS	Sugar transporter signature	418	428	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Enph10g0288	611	PRINTS	Sugar transporter signature	528	540	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Enph10g0288	611	PRINTS	Sugar transporter signature	505	526	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Enph10g0288	611	CDD	MFS_GLUT_like	173	577	-	-
	Enph10g0288	611	PANTHER	SOLUTE CARRIER FAMILY 2	161	577	IPR045263	-
	Enph10g0288	611	Pfam	Sugar (and other) transporter	171	577	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Enph10g0288	611	Gene3D	MFS general substrate transporter like domains	164	582	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Enph10g0288	Enph-Chr10	4745608	4752945	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Enph10g0288	161	549	Organic Solute Cotransporters	AT1G67300	71.100	0.0	548

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Enph10g0288	-		-	gmx:100811182	707.983