Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1986 ATGGACAAGGAAGTGGAGCGTTGTTCCGGTGAAGGTGGTGAAATGTCTTGCCAAAACACTTCACAACCACAAAGGCGCAAGGGTGGTCTCGTTACCATGCCTTTCATCATAGCAAATGAGGCATTTGCGAGGGTGGCAAACATAGGCCTTCAGCCAAACATGACATTGTACTTGATAGGGAATTACAGGCTTCATTTGGGGAAAGCAAACCAGATACTGCTTTTGTTCAGTGCAGCCAGCAATTTCACCCCTGTGGTGGGTGGCTTCATTGCCGATTCTCATCTGGGTCGATTCCTCGCTATTGCCTTGGGATGTGTCATCACTTTTCTGGGAATGACACTGCTGTGGTTAACAGCAATGATCCCACAGGCAAGGCCTCCCCCTTGCAACCAAGCAACTGAAAGCTGTAAATCAGCAACAGGTGGTCAAATGGCAATGTTACTCTCTTCCTTTGCGCTCATGTCCATTGGAAATGGTGGCCTCACATGTTCCTTAGCATTCGGTGCTGACCAAGTTAACAGAAAAGATAACCCCAATAACCAGAGGGTCTTGGAAACTTTCTTCAGCTGGTACTATGCTTCTACAGCTATCTCTGTCATAATTGCCCTCACAGGAATAGTATACATCCAAGATCATCAAGGATGGAAAGTGGGTTTTGGAATCCCAGCGGCACTTATGCTTTTATCCACTCTCTTCTTCTTCCTAGCTTCTCCACTTTATCTAAAGAACAAAACACAAAATAGCTTGCTCACTGGATTTGCACAAGTAATTGTTGTGGTCTATAAGAACAGAAAACTTCCATTACCACCTAACAACTCGCCTGAACTATACCATCATAAGAAGGACTCGGATCTTGTTGTTCCAACCGATAAACTAAGGTTTCTGAATAAAGCTTGTGTAATTAAAGATCCAGGACAAGATGTAGCTTCTGATGGATCAGCATCCAATCCATGGAGTCTGTGCACAATAGATCAAGTAGAGGAACTAAAAGCCATTATCAAAGTTATTCCCTTGTGGTCAACGGCGATCATGATGTCACTTAGCATTGGAGGCTCATTTGGGTTGGTGCAAGCTGAATCCATGGACAGACACGTCACCTCACACTTCCAAGTTCCAGCAGGATCTTTTTCTGTGATCACGGTAGTTACAATATTTATATGGATAGCTCTCTATGATCGTGTCATTCTCCCTCTAGCATCAAAGATAAGAGGCAAACAAGTTAGGATCAGTGCAAAGACAAGAATGGGAATTGGGGTGTTCTTCTATTTTCTCAGCATCGTTGCTTCAGCAATTGTTGAGACCATAAGGCGAAGGAGGGCAATCAAGGAGGGATACATCAACAATCCTCATGCAGTGTTGAACATGTCTGCATTGTGGCTTGTCCCTCAACTTAGCTTGGCTGGCATAGCTGAAGCATTCAATGTAGTAGGCCAAAATGAGTTCTATTACAGTGAGTTTCCTAAGACATTGTTAAGTGTTTCTTCTTCCCTTTTGGGACTGGCAATGGCTGCAGGAAGCCTGGTGTCTTCTTCTATATTCAGCATTGTGGAAAACGTTACTTCAAGAGGGGGAAAACAAGGTTGGCTTTCAGATAATATTAACAAGGGTCGTTATGATAAGTACTATTGGTTGCTTGTTGGACTTAGTGCTCTGAATATAGTGTACTATGTGATATGCAGTTGGGCTTATGGGCCTACCGTTGATCAACTGTCCAAGGTAACTGAAGAAAATGGCTCAGAGGGGAAAGTGTTAACTGAATTGGGGAATGGGGGTTCATGTTGA 1782 0.4371 MDKEVERCSGEGGEMSCQNTSQPQRRKGGLVTMPFIIANEAFARVANIGLQPNMTLYLIGNYRLHLGKANQILLLFSAASNFTPVVGGFIADSHLGRFLAIALGCVITFLGMTLLWLTAMIPQARPPPCNQATESCKSATGGQMAMLLSSFALMSIGNGGLTCSLAFGADQVNRKDNPNNQRVLETFFSWYYASTAISVIIALTGIVYIQDHQGWKVGFGIPAALMLLSTLFFFLASPLYLKNKTQNSLLTGFAQVIVVVYKNRKLPLPPNNSPELYHHKKDSDLVVPTDKLRFLNKACVIKDPGQDVASDGSASNPWSLCTIDQVEELKAIIKVIPLWSTAIMMSLSIGGSFGLVQAESMDRHVTSHFQVPAGSFSVITVVTIFIWIALYDRVILPLASKIRGKQVRISAKTRMGIGVFFYFLSIVASAIVETIRRRRAIKEGYINNPHAVLNMSALWLVPQLSLAGIAEAFNVVGQNEFYYSEFPKTLLSVSSSLLGLAMAAGSLVSSSIFSIVENVTSRGGKQGWLSDNINKGRYDKYYWLLVGLSALNIVYYVICSWAYGPTVDQLSKVTEENGSEGKVLTELGNGGSC* 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1986 593 Pfam POT family 99 529 IPR000109 GO:0016020|GO:0022857|GO:0055085
Dod10g1986 593 PANTHER PEPTIDE/NITRATE TRANSPORTER 16 577 - -
Dod10g1986 593 MobiDBLite consensus disorder prediction 1 25 - -
Dod10g1986 593 SUPERFAMILY MFS general substrate transporter 57 559 IPR036259 -
Dod10g1986 593 CDD MFS_NPF1_2 33 563 - -
Dod10g1986 593 Gene3D MFS general substrate transporter like domains 4 571 IPR036259 -
Dod10g1986 593 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 16 577 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1986 Dod-Chr10 41665951 41669680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod10g1986 19 570 Organic Solute Cotransporters AT1G52190 56.429 0.0 689
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1986 - K14638 gmx:100792940 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1986 10 41665951 41669680 Dod10g1986 10 41665951 41669680 ECH
Dod10g1986 10 41665951 41669680 Dod06g2606 06 55707756 55711105 PCT