Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1948 ATGTATAGGGCAGCAGCTTCACGTCTCGCCCATCTCAAGGGCCATGGGAGAAGAACCTTGGGAGCCACTAGGCTTGCTACATCAAGTGCAGTAGCTACAAAGCCTGCCTCAGGAGGTTTGTTCAGCTGGCTTACTGGGGAGAGTTCTAGTTCTCTTCCTCCTTTGGACACACCACTTAGTGGTGTTACCCTCCCTCCTCCACTTCCAGATAATGTTGAGCCAAGCAAGACCAAGATCACTACTCTCCCCAATGGACTCAAAGTTGCATCAGAGACATCACCAAACCCTGCAGCCTCAACAGGGTTGTATCTTGACTGTGGTTCTCTCTATGAGACGCCATGGTCAAGCGGGGCATCGCACTTGCTTGAGCGAATGGCTTTCAAGAGCACAACAAACCGAAGCCATTTCCGTATTGTAAGGGAAGTAGAAGCAATTGGTGGTAATGTAGGAGCCTCAGCCTCTCGGGAGCAAATGGGCTACACATTTGATGCTCTGAAAACCTATGTTCCTCAAATGATTGAATTGCTAGTTGACTGTGTAAGGAACCCAGCCTTCTTGGATTGGGAGGTCAATGAAGAGCTTCGAAAGGTGAAAGCAGAGCTTGGAGAACTATCAAACAACCCCCAGGGCTTACTTTTGGAGGCAATTCACTCTGCTGGTTATTCTGGTGCATTGGCTAATCCACTTTTGGCTCCCGAATCAGCACTGAACAGATTAGATGGCTCCATTTTGGAGGAATTTGTTGCCGAGAATTATACTGCACCTAGAATGGTGCTTGCAGCATCTGGGGTTGAGCATGAGGAACTTCTATCTGTTGCTGAGCCACTCCTCTCTGATCTACCCAATGTTCCCCGTCCTGAAGAACCAAAATCTACCTATGTCGGTGGTGATTTTCGTCGTCAAGGTGAATCAGGGGGTGCACATGTCGCTATTGCTTTTGAAGTGCCTGGTGGCTGGCAAAAAGAGAAAGATGCTATTGTTTTGACAGTTCTACAGATGCTTATGGGAGGAGGTGGATCCTTCTCAGCAGGGGGGCCTGGAAAAGGAATGCATTCAAGGCTATATCTTCGTGTCTTGAATGAATATCAACAGATTCAAGCTTTTTCTGCATTCAACAGTATCTTCAACAATACAGGATTATTTGGCATATATGCAAGCACTAGCTCTGATTTTGTGGCAAAAGCTGTGGATATAGCAGCCAAAGAATTAATAGAAATTGCATCACCTGGACAAGTTTCACAGGTACAGCTTGACCGAGCCAAAGAATCCACAAAATCTGCAGTGCTAATGAATTTGGAATCCAGAATGATTGCATCAGAGGATATAGGAAGGCAGATATTGACTTATGGAGAAAGGAAGCCTGTGGAGCTGTTCCTGAAGGCTGTAGATGGAATCACTTTAAATGACATCACTAAAATTTCTCAGAAGATTATTTCCTCACCTCTGACTATGGCATCTTACGGGGATGTTGTCAATGTTCCCAGTTATGAATCCGTTAGCAGGAAGTTCCATGCAAAATGA 1521 0.4576 MYRAAASRLAHLKGHGRRTLGATRLATSSAVATKPASGGLFSWLTGESSSSLPPLDTPLSGVTLPPPLPDNVEPSKTKITTLPNGLKVASETSPNPAASTGLYLDCGSLYETPWSSGASHLLERMAFKSTTNRSHFRIVREVEAIGGNVGASASREQMGYTFDALKTYVPQMIELLVDCVRNPAFLDWEVNEELRKVKAELGELSNNPQGLLLEAIHSAGYSGALANPLLAPESALNRLDGSILEEFVAENYTAPRMVLAASGVEHEELLSVAEPLLSDLPNVPRPEEPKSTYVGGDFRRQGESGGAHVAIAFEVPGGWQKEKDAIVLTVLQMLMGGGGSFSAGGPGKGMHSRLYLRVLNEYQQIQAFSAFNSIFNNTGLFGIYASTSSDFVAKAVDIAAKELIEIASPGQVSQVQLDRAKESTKSAVLMNLESRMIASEDIGRQILTYGERKPVELFLKAVDGITLNDITKISQKIISSPLTMASYGDVVNVPSYESVSRKFHAK* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1948 506 Gene3D - 67 279 - -
Dod10g1948 506 Pfam Insulinase (Peptidase family M16) 87 233 IPR011765 -
Dod10g1948 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 302 497 IPR011249 GO:0046872
Dod10g1948 506 Gene3D - 291 503 - -
Dod10g1948 506 PANTHER MITOCHONDRIAL-PROCESSING PEPTIDASE SUBUNIT ALPHA-LIKE 17 505 IPR037715 GO:0006627
Dod10g1948 506 Pfam Peptidase M16 inactive domain 244 422 IPR007863 -
Dod10g1948 506 ProSitePatterns Insulinase family, zinc-binding region signature. 107 130 IPR001431 GO:0004222|GO:0006508
Dod10g1948 506 SUPERFAMILY LuxS/MPP-like metallohydrolase 76 286 IPR011249 GO:0046872
Dod10g1948 506 PANTHER METALLOPROTEASE 17 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1948 Dod-Chr10 41284352 41289836 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1948 K01412 - gmx:100810990 855.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1948 10 41284352 41289836 Dod10g1948 10 41284352 41289836 ECH
Dod10g1948 10 41284352 41289836 Dod06g2659 06 56658793 56665402 PCT