Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1947 ATGTTAGATTGTGCAACTTCCGATGCCAAAATCACCACCTTGGATTCTGGCTTTGTACTTGAGGATGTTCCTCACCTATCTGATTACATACCTGGTCTTCCTACATATCCTGACCCGTTACAAGACAATCCTTCCTACGCAGTTGTTAAGCAGTACTATGTGCATGTAGATGATACAGTGGCGCAACAGATAGTTGTACACAAAAATAGTCCTAGAGGAATCCATTTCAGGCGTTCTGGGCCTGCTGAGAAGGTATATTTTGACTCAGAGGAAGTGTGTGCTTGTATTGTCACATGTGGTGGCCTTTGTCCTGGACTAAATACAGTTATAAGAGAAATAGTGTGTGGCTTATACCATATGTATGGGGTGCACAGAGTTCTGGGAATAAAGGGAGGATATAGAGGTTTCTATTCTCGGAATACAGTTCCTTTAACACCAAAGGTAGTCAATGATATCCACAAGCGTGGTGGAACCATCCTTGGCACATCATACGGTGGCCACGACACCTCAAAGATTGTTGATAGCATTCAGGATCGGGGCATTAATCAGGTCTATATACTTGGAGGATTTGGGACTCAACAGGAGGCTGCTTTGATCTTTGAGGAAATTAGAAGACGCGGCTTGAAAGTTTCAGTGGTCGGAATTCCAAAAACTATTGATAACGATATCCCGGTCATTGACAAGTCTATTGGATTTGACACTGCTGTTGAAGAGGCACAGAGAGCTATCAACTCTGCCCATGTTGAAGCAGAGAGCACCGAGAATTGTATTGGTGTTGTCAAGTTAATGGGGCGTTGGAGTGGATTTATAGCCATGTATGCAACCCTTGCGAGCCGGGATGTGGACTGTTGCTTGATTCCAGAATCACCCTTTTATCTTGAGGGTCCAGGTGGACTCCTGGAGTTCATTGAGAAAAGACTGAAAGAGCAAGGCCACATGGTTATAGTAGTTGCTGAAGGTGCAGGCCACGAGCTTCTTTCTGTAAACCCATCTGCTGTCAGGAAACCAGAGGATGCTTCTGCACACAATGTAGTTGAAGATGTTGGTCTGTGGTTATCCCAGAAAATTAAGGACCACTTTGCAAAACATCCAAAAATGGCAATAAGTCTCAAGTACATTGATCCTACTTACATGATCCGTGCTATTCCAAGTAACGCATCTGACAATGTGTTTTGTACCCTGCTTGCTCAAAGTGCTGTTCATGGTGCAATGGCTGGATACACCGGATTCACAGTGGGCCCAGTTAATGGCAGAAATTGTTACATTCCATTTCATATGATAAATGAAGGAGAGAAAAGCGTTGTGATAACTGATCGGATGTGGGCAAGGTTACTATCTTCAACCCATCAGCCTAGCTTCTTGGATCCTAAAGAAATTGCTGGAGCAAGAGATGAAGGAACCGAACACCAAACATCAGATGGCTAA 1425 0.4393 MLDCATSDAKITTLDSGFVLEDVPHLSDYIPGLPTYPDPLQDNPSYAVVKQYYVHVDDTVAQQIVVHKNSPRGIHFRRSGPAEKVYFDSEEVCACIVTCGGLCPGLNTVIREIVCGLYHMYGVHRVLGIKGGYRGFYSRNTVPLTPKVVNDIHKRGGTILGTSYGGHDTSKIVDSIQDRGINQVYILGGFGTQQEAALIFEEIRRRGLKVSVVGIPKTIDNDIPVIDKSIGFDTAVEEAQRAINSAHVEAESTENCIGVVKLMGRWSGFIAMYATLASRDVDCCLIPESPFYLEGPGGLLEFIEKRLKEQGHMVIVVAEGAGHELLSVNPSAVRKPEDASAHNVVEDVGLWLSQKIKDHFAKHPKMAISLKYIDPTYMIRAIPSNASDNVFCTLLAQSAVHGAMAGYTGFTVGPVNGRNCYIPFHMINEGEKSVVITDRMWARLLSSTHQPSFLDPKEIAGARDEGTEHQTSDG* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1947 474 PRINTS ATP-dependent phosphofructokinase family signature 180 196 IPR022953 GO:0003872|GO:0006002|GO:0006096
Dod10g1947 474 PRINTS ATP-dependent phosphofructokinase family signature 252 268 IPR022953 GO:0003872|GO:0006002|GO:0006096
Dod10g1947 474 PRINTS ATP-dependent phosphofructokinase family signature 309 321 IPR022953 GO:0003872|GO:0006002|GO:0006096
Dod10g1947 474 PRINTS ATP-dependent phosphofructokinase family signature 213 230 IPR022953 GO:0003872|GO:0006002|GO:0006096
Dod10g1947 474 PRINTS ATP-dependent phosphofructokinase family signature 96 115 IPR022953 GO:0003872|GO:0006002|GO:0006096
Dod10g1947 474 PRINTS ATP-dependent phosphofructokinase family signature 231 249 IPR022953 GO:0003872|GO:0006002|GO:0006096
Dod10g1947 474 SUPERFAMILY Phosphofructokinase 27 454 IPR035966 GO:0003872|GO:0006096
Dod10g1947 474 MobiDBLite consensus disorder prediction 458 474 - -
Dod10g1947 474 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 23 454 IPR012004 GO:0003872|GO:0005524|GO:0006096
Dod10g1947 474 MobiDBLite consensus disorder prediction 453 474 - -
Dod10g1947 474 Pfam Phosphofructokinase 95 401 IPR000023 GO:0003872|GO:0006096
Dod10g1947 474 PANTHER - 6 471 - -
Dod10g1947 474 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 6 471 - -
Dod10g1947 474 Gene3D - 88 277 - -
Dod10g1947 474 PIRSF ATP_PFK_TP0108 13 458 IPR012004 GO:0003872|GO:0005524|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1947 Dod-Chr10 41278694 41282512 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1947 K00850 - gmx:100796769 850.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1947 10 41278694 41282512 Dod06g2660 06 56673943 56679424 PCT