Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1833 ATGCAGATGCTCTCAAAGGCTTCATCTGCCATGGCCACCTTCCCTCCCTCTAGGGTGAGAAGTGGGTTTTGTATGTGGCCAGATGTGAGACAACTTTGCTTTAGAAAACGCATTCTATATGGATTCATGCGATTGTTTTCAACACCATTGAAAACACTGCGTGTAGCTAGTCGCTCTCTCAGAGTAGGACAATTTTGCAGTGTTGTCAATATGTCTTCCTCATTGCAAATTGAATTGGTACCGTGCTTGAGGGACAATTATGCTTATCTTTTACATGATGTGAATACCGGCACAGTTGGTGTTGTTGATCCTTCTGAAGCTGTGCCTGTCATAGATGCATTGAGCAGGAAGAATCGGAATTTGACATACATACTCAACACTCACCATCATTATGATCACACTGGTGGAAATGCAGAGTTGAAAGCAAGATATGGGGCCAAGGTGATTGGTTCAGGAACTGACAAGGAAAGGATTCCTGGTATTGATATCTATTTGAATGATGGTGATAAGTGGATGTTTGCTGGCCATGAGGTGCATGTAATGGACACACCTGGTCACACCCGAGGCCACATAAGCTTCTACTTTCCTGGATCTATGGCAATATTTACAGGAGACACTCTATTCAGCTTATCATGTGGCAAGCTCTTTGAAGGAACTCCTGAACAGATGCTATCTTCTCTTAAAAAGATAATGTCTTTGCCAGAAGATACAAGTATCTACTGTGGACATGAGTATACATTGAGTAATTCAAAGTTTGCATTGTCCATTGAACCTGGCAACAAGGAACTTCAATCCTATGCTGCCCAGGTAGCTTACCTTCGAAGCAGGGGCTTGCCCACGATTCCAACAACACTAAAGATGGAGAAGGCTTGTAATCCATTCCTTCGTACATCCAGCGCAGAAATCCGGCGATTGCTAAACATTGCGGATACAGCCAATGATGCAGAAGCCCTGGGAGTCATCCGGGGAGCAAAGGATAATTTTTAG 987 0.4367 MQMLSKASSAMATFPPSRVRSGFCMWPDVRQLCFRKRILYGFMRLFSTPLKTLRVASRSLRVGQFCSVVNMSSSLQIELVPCLRDNYAYLLHDVNTGTVGVVDPSEAVPVIDALSRKNRNLTYILNTHHHYDHTGGNAELKARYGAKVIGSGTDKERIPGIDIYLNDGDKWMFAGHEVHVMDTPGHTRGHISFYFPGSMAIFTGDTLFSLSCGKLFEGTPEQMLSSLKKIMSLPEDTSIYCGHEYTLSNSKFALSIEPGNKELQSYAAQVAYLRSRGLPTIPTTLKMEKACNPFLRTSSAEIRRLLNIADTANDAEALGVIRGAKDNF* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1833 328 Hamap Hydroxyacylglutathione hydrolase [gloB]. 75 328 IPR017782 GO:0004416|GO:0019243
Dod10g1833 328 Pfam Metallo-beta-lactamase superfamily 87 243 IPR001279 -
Dod10g1833 328 CDD hydroxyacylglutathione_hydrolase_MBL-fold 80 243 IPR035680 -
Dod10g1833 328 Gene3D - 75 328 IPR036866 -
Dod10g1833 328 SUPERFAMILY Metallo-hydrolase/oxidoreductase 75 328 IPR036866 -
Dod10g1833 328 Pfam Hydroxyacylglutathione hydrolase C-terminus 244 328 IPR032282 -
Dod10g1833 328 TIGRFAM GSH_gloB: hydroxyacylglutathione hydrolase 78 328 IPR017782 GO:0004416|GO:0019243
Dod10g1833 328 PANTHER HYDROXYACYLGLUTATHIONE HYDROLASE 3 328 - -
Dod10g1833 328 SMART Lactamase_B_5a 85 243 IPR001279 -
Dod10g1833 328 PANTHER BETA LACTAMASE DOMAIN 3 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1833 Dod-Chr10 39791945 39795777 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1833 K01069 - gmx:100816314 593.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1833 10 39791945 39795777 Dod10g1833 10 39791945 39795777 ECH
Dod10g1833 10 39791945 39795777 Dod03g3049 03 63250134 63254722 PCT