Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1768 ATGGCTAAGAAACAGGGTCTCTATTCATCAGGGGATTGGAGGAGGCTACCAGCTTGCACTTTCTTTAAGGATGCCAGACTAGTTTTTAAATTAGACAGTCTTGGTCGGGAAATATTGTCAATTGCACTGCCTGCTGCCATGGCTTTGACAGCTGACCCTATTGCTTCACTTATTGACACCGCATTCATTGGCCGAATAGGTCCAGCGGAGCTTGCTGCCGTAGGAGTCTCAATAGCTCTCTTCAATCAAGTATCACGGATTGCAATATTCCCCCTTGTCAGCTGCACAACCTCTTTCGTAGCTGAGGAAGATACCATCAATGGGGCGAGCCCTCAGGTAGATGAGACTGAATGCTTGGAAGCAGGTTCACCCTCGGATGGTGAAACCAAATATTTCTTACCAAAGAAAGGTGGAACCGTGCACAAACCAGCTTTGGTTGGTGAAAGCTTTAACGTAGTTAAGGAGGAAAATAAGAAAAGACATATCCCTTCAGCTTCATCAGCATTATTTATTGGTGGCATCCTTGGCTTCATCCAGGCAATATTACTTATATCTGCGGCAAAACCTTTATTGAATTTCATGGGAGTATCGTCTGACTCTCCTATGCTACACCCTGCACAGCAGTACCTGACATTGAGGTCCCTCGGTGCTCCTGCAGTTCTTCTCTCATTAGCGATGCAGGGAGTCTTCCGAGGATTTAAAGACACTAGAACTCCTCTCTATGCCACTGTGGCAGGAGATGTGACCAACATAGCACTAGATCCTCTATTCATGTTTGTATTCCGCTTGGGTGTCAGTGGTGCAGCCATTGCCCATGTTTTATCTCAGTACCTAATTTCAGTTATACTCCTGTGGAAGTTGATGCAACGAGTTGATCTGATACCTCCAAGCATCAAGCATTTGCAATTTGACCGATTTCTTAAAAATGGTTTCCTATTATTAATGAGAGTCATTGCTGTAACATTCTGTGTGACACTGGCTGCATCATTAGCTGCACGCCAGGGATCAACATCTATGGCTGCATTTCAAGTTTGCCTACAGGTTTGGTTGGCAGTGTCTCTTCTTGCTGATGGTCTGGCCGTTGCTGGGCAGGCGATTCTTGCGGGTGCATTTGCTAATAAGGACTATGACAAGGCCACCGCAACTGCTTCCCGAGTATTGCAGATGGGTTTGGTACTAGGAGTGGCGCTTGCATTCATCCTTGGAACAGGATTGCATTTTGGAGCTAAGCTATTTACTCAAGATGTTAATGTCCTTCATCTCATTAGAGTTGGGATCCCGTTTGTTGCACTCACGCAACCCCTGAACTCTTTGGCATTTGTGTTTGATGGTGTCAACTTTGGGGCATCTGATTTTGCATATTCAGCCTTCTCTATGGTTGTGGTGGCCATTATTAGCATCGTTTGTCTACTTATCTTGTCACCTGCTGGTGGTTTCATTGGAATTTGGGTTGCTTTGGCAATCTATATGGCTCTCAGGGCATTTGCTGGCTTCTTGAGGATTGGAACTGGATCAGGACCTTGGGATTTCCTCTGGAGCTGA 1542 0.4565 MAKKQGLYSSGDWRRLPACTFFKDARLVFKLDSLGREILSIALPAAMALTADPIASLIDTAFIGRIGPAELAAVGVSIALFNQVSRIAIFPLVSCTTSFVAEEDTINGASPQVDETECLEAGSPSDGETKYFLPKKGGTVHKPALVGESFNVVKEENKKRHIPSASSALFIGGILGFIQAILLISAAKPLLNFMGVSSDSPMLHPAQQYLTLRSLGAPAVLLSLAMQGVFRGFKDTRTPLYATVAGDVTNIALDPLFMFVFRLGVSGAAIAHVLSQYLISVILLWKLMQRVDLIPPSIKHLQFDRFLKNGFLLLMRVIAVTFCVTLAASLAARQGSTSMAAFQVCLQVWLAVSLLADGLAVAGQAILAGAFANKDYDKATATASRVLQMGLVLGVALAFILGTGLHFGAKLFTQDVNVLHLIRVGIPFVALTQPLNSLAFVFDGVNFGASDFAYSAFSMVVVAIISIVCLLILSPAGGFIGIWVALAIYMALRAFAGFLRIGTGSGPWDFLWS* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1768 513 CDD MATE_DinF_like 34 503 IPR044644 -
Dod10g1768 513 Pfam MatE 315 468 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod10g1768 513 Pfam MatE 159 256 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod10g1768 513 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 149 511 IPR044644 -
Dod10g1768 513 TIGRFAM matE: MATE efflux family protein 44 483 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod10g1768 513 PANTHER PROTEIN DETOXIFICATION 43 12 118 - -
Dod10g1768 513 PANTHER PROTEIN DETOXIFICATION 43 149 511 - -
Dod10g1768 513 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 12 118 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1768 Dod-Chr10 38770442 38774730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1768 K03327 - gmx:100780165 872.463
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1768 10 38770442 38774730 Dod10g1768 10 38770442 38774730 ECH
Dod10g1768 10 38770442 38774730 Dod03g2987 03 62130786 62135487 ECH
Dod07g1195 07 31020362 31027445 Dod10g1768 10 38770442 38774730 ECH
Dod10g1768 10 38770442 38774730 Dod03g2987 03 62130786 62135487 PCT