Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod10g1740 ATGGAAAACGGGAATCAGTTTCAGGAAGTTTCAAAGGCAAAATACGATTGCCTATTATTTGATCTGGATGACACCCTTTACCCTTTTAGTTCTGGAGTGTCTGCGCATGTGACTCAGAACATTCAAGAGTACATGGTTCAAAAGCTTGGGATAGATGAGGGTAAAGTTCCAGATTTGTGCAATTCATTATATAAGATTTATGGGACAACAATGGCTGGTCTCAGGGCAATTGGATATGACTTTGACTATGATGACTTTCATGGTTTTGTTCATGGGAGATTGCCATATAATCTGCTGAAACCTGACCCTGTACTCAGGGGAATTTTGCTAAGCCTGCCTCTTAGAAAAGTTGTTTTTACAAACTCAGATGAGGCCCATGCTGGTAGAGTGCTTCAGAGGCTTGGATTGGAGGACTGCTTTGAAAGAATCATAAGCTTTGAAACTTTGAACCCCTCCAACAACATAAATAAAGGTGGCTGTGAAAATAGACCAAGTACCACAGGAATCTTTGATTTTTATGAGTACTTGCGTAGGCCTGACTCTGATGTAGTGCTTCCAAAGACCCCGGTAGTCTGCAAACCCTTTCCAGATGCATTTGAAAAGGTTTTCAATATGGCTGATATTGACCCTCAAAGAACATTGTTCTTTGACGACAGTATCCGCAACTTGGTGATGGGAAAATCATTGGGCCTTCACACTGTATTGGTGGGTACTTCCGTCCGAACTACAGGAGTTGATCATGCATTAGAGAGCATACATAATGTTAAGGAGGCATTTCCGGAACTGTGGGAAGCCGCAGAGAAGTCTGATGAAAGGGTCAAGTATTCTAGGAAGGTTTCAATTGAAACATCGGTTATAGCTTAG 864 0.4178 MENGNQFQEVSKAKYDCLLFDLDDTLYPFSSGVSAHVTQNIQEYMVQKLGIDEGKVPDLCNSLYKIYGTTMAGLRAIGYDFDYDDFHGFVHGRLPYNLLKPDPVLRGILLSLPLRKVVFTNSDEAHAGRVLQRLGLEDCFERIISFETLNPSNNINKGGCENRPSTTGIFDFYEYLRRPDSDVVLPKTPVVCKPFPDAFEKVFNMADIDPQRTLFFDDSIRNLVMGKSLGLHTVLVGTSVRTTGVDHALESIHNVKEAFPELWEAAEKSDERVKYSRKVSIETSVIA* 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod10g1740 287 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 186 236 IPR006439 -
Dod10g1740 287 CDD HAD_5NT 17 238 IPR010237 -
Dod10g1740 287 SUPERFAMILY HAD-like 14 262 IPR036412 -
Dod10g1740 287 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 287 - -
Dod10g1740 287 Gene3D - 108 271 IPR023214 -
Dod10g1740 287 SFLD Haloacid Dehalogenase 11 269 - -
Dod10g1740 287 SFLD C1.5.3: 5'-Nucleotidase Like 11 269 IPR010237 -
Dod10g1740 287 TIGRFAM Pyr-5-nucltdase: pyrimidine 5'-nucleotidase 16 236 IPR010237 -
Dod10g1740 287 Gene3D - 5 99 - -
Dod10g1740 287 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 1 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod10g1740 Dod-Chr10 38502435 38505578 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod10g1740 K07025 - gmx:100790444 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod10g1740 10 38502435 38505578 Dod10g1740 10 38502435 38505578 ECH
Dod10g1740 10 38502435 38505578 Dod03g2947 03 61728065 61737281 PCT